Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Krt28A6BLY7 Gm15358-201ENSMUST00000119249 520 ntBASIC17.79■□□□□ 0.44
Krt28A6BLY7 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.79■□□□□ 0.44
Krt28A6BLY7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.79■□□□□ 0.44
Krt28A6BLY7 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.79■□□□□ 0.44
Krt28A6BLY7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.79■□□□□ 0.44
Krt28A6BLY7 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.79■□□□□ 0.44
Krt28A6BLY7 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.79■□□□□ 0.44
Krt28A6BLY7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Krt28A6BLY7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Krt28A6BLY7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.79■□□□□ 0.44
Krt28A6BLY7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt28A6BLY7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt28A6BLY7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Krt28A6BLY7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Krt28A6BLY7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt28A6BLY7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.78■□□□□ 0.44
Krt28A6BLY7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Krt28A6BLY7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt28A6BLY7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Krt28A6BLY7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt28A6BLY7 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.78■□□□□ 0.44
Krt28A6BLY7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Krt28A6BLY7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt28A6BLY7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.78■□□□□ 0.44
Krt28A6BLY7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.78■□□□□ 0.44
Krt28A6BLY7 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.78■□□□□ 0.44
Krt28A6BLY7 Gm27301-201ENSMUST00000184012 127 ntBASIC17.78■□□□□ 0.44
Krt28A6BLY7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.78■□□□□ 0.44
Krt28A6BLY7 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Krt28A6BLY7 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt28A6BLY7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Krt28A6BLY7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt28A6BLY7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt28A6BLY7 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt28A6BLY7 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.78■□□□□ 0.44
Krt28A6BLY7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Krt28A6BLY7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Krt28A6BLY7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt28A6BLY7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.78■□□□□ 0.44
Krt28A6BLY7 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Krt28A6BLY7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.77■□□□□ 0.44
Krt28A6BLY7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Krt28A6BLY7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Krt28A6BLY7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Krt28A6BLY7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Krt28A6BLY7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Krt28A6BLY7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Krt28A6BLY7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Krt28A6BLY7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Krt28A6BLY7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.77■□□□□ 0.44
Krt28A6BLY7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Krt28A6BLY7 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Krt28A6BLY7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Krt28A6BLY7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.77■□□□□ 0.44
Krt28A6BLY7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Krt28A6BLY7 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Krt28A6BLY7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Krt28A6BLY7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Krt28A6BLY7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Krt28A6BLY7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.77■□□□□ 0.43
Krt28A6BLY7 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.77■□□□□ 0.43
Krt28A6BLY7 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Krt28A6BLY7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Krt28A6BLY7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Gm15427-201ENSMUST00000117288 531 ntBASIC17.76■□□□□ 0.43
Krt28A6BLY7 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.76■□□□□ 0.43
Krt28A6BLY7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Gm5745-201ENSMUST00000183748 313 ntBASIC17.76■□□□□ 0.43
Krt28A6BLY7 Gm9682-201ENSMUST00000197505 556 ntBASIC17.76■□□□□ 0.43
Krt28A6BLY7 Gm45612-201ENSMUST00000211320 160 ntBASIC17.76■□□□□ 0.43
Krt28A6BLY7 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.76■□□□□ 0.43
Krt28A6BLY7 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krt28A6BLY7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms