Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn1aA2APX8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn1aA2APX8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn1aA2APX8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn1aA2APX8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn1aA2APX8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Scn1aA2APX8 Gm13418-201ENSMUST00000119097 944 ntBASIC16.81■□□□□ 0.28
Scn1aA2APX8 Gm15173-201ENSMUST00000122049 433 ntBASIC16.81■□□□□ 0.28
Scn1aA2APX8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn1aA2APX8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.81■□□□□ 0.28
Scn1aA2APX8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn1aA2APX8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn1aA2APX8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn1aA2APX8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn1aA2APX8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn1aA2APX8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn1aA2APX8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn1aA2APX8 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.81■□□□□ 0.28
Scn1aA2APX8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.81■□□□□ 0.28
Scn1aA2APX8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn1aA2APX8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn1aA2APX8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn1aA2APX8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.8■□□□□ 0.28
Scn1aA2APX8 Gm8655-201ENSMUST00000221159 852 ntBASIC16.8■□□□□ 0.28
Scn1aA2APX8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn1aA2APX8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Scn1aA2APX8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn1aA2APX8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn1aA2APX8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn1aA2APX8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.8■□□□□ 0.28
Scn1aA2APX8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.8■□□□□ 0.28
Scn1aA2APX8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.8■□□□□ 0.28
Scn1aA2APX8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn1aA2APX8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Scn1aA2APX8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
Scn1aA2APX8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn1aA2APX8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn1aA2APX8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn1aA2APX8 Gm12350-201ENSMUST00000121208 462 ntBASIC16.8■□□□□ 0.28
Scn1aA2APX8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Scn1aA2APX8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Scn1aA2APX8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn1aA2APX8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Scn1aA2APX8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Scn1aA2APX8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn1aA2APX8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn1aA2APX8 Gm18195-201ENSMUST00000207604 706 ntBASIC16.79■□□□□ 0.28
Scn1aA2APX8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.79■□□□□ 0.28
Scn1aA2APX8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Scn1aA2APX8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn1aA2APX8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn1aA2APX8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn1aA2APX8 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.79■□□□□ 0.28
Scn1aA2APX8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn1aA2APX8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn1aA2APX8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Scn1aA2APX8 Gm8344-201ENSMUST00000119813 856 ntBASIC16.79■□□□□ 0.28
Scn1aA2APX8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.79■□□□□ 0.28
Scn1aA2APX8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn1aA2APX8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn1aA2APX8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn1aA2APX8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.79■□□□□ 0.28
Scn1aA2APX8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.79■□□□□ 0.28
Scn1aA2APX8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn1aA2APX8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn1aA2APX8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn1aA2APX8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn1aA2APX8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.78■□□□□ 0.28
Scn1aA2APX8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Scn1aA2APX8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.78■□□□□ 0.28
Scn1aA2APX8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Scn1aA2APX8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn1aA2APX8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn1aA2APX8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn1aA2APX8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn1aA2APX8 Gm7862-201ENSMUST00000121461 292 ntBASIC16.78■□□□□ 0.28
Scn1aA2APX8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn1aA2APX8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn1aA2APX8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn1aA2APX8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn1aA2APX8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn1aA2APX8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn1aA2APX8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn1aA2APX8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn1aA2APX8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Scn1aA2APX8 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.77■□□□□ 0.28
Scn1aA2APX8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn1aA2APX8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn1aA2APX8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scn1aA2APX8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn1aA2APX8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn1aA2APX8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn1aA2APX8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn1aA2APX8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Scn1aA2APX8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn1aA2APX8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn1aA2APX8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn1aA2APX8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.77■□□□□ 0.27
Scn1aA2APX8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn1aA2APX8 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms