Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Shroom2A2ALU4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Shroom2A2ALU4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Shroom2A2ALU4 Gm16499-203ENSMUST00000204633 2177 ntBASIC25.23■■□□□ 1.63
Shroom2A2ALU4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC25.23■■□□□ 1.63
Shroom2A2ALU4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Shroom2A2ALU4 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC25.23■■□□□ 1.63
Shroom2A2ALU4 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Shroom2A2ALU4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
Shroom2A2ALU4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Shroom2A2ALU4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Shroom2A2ALU4 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Shroom2A2ALU4 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Shroom2A2ALU4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Shroom2A2ALU4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Shroom2A2ALU4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Shroom2A2ALU4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Shroom2A2ALU4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Shroom2A2ALU4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Shroom2A2ALU4 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Shroom2A2ALU4 Gm7775-201ENSMUST00000218871 853 ntBASIC25.22■■□□□ 1.63
Shroom2A2ALU4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
Shroom2A2ALU4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Shroom2A2ALU4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Shroom2A2ALU4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Shroom2A2ALU4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Shroom2A2ALU4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Shroom2A2ALU4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Shroom2A2ALU4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Shroom2A2ALU4 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Shroom2A2ALU4 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Shroom2A2ALU4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC25.21■■□□□ 1.63
Shroom2A2ALU4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC25.21■■□□□ 1.63
Shroom2A2ALU4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Shroom2A2ALU4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Shroom2A2ALU4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Shroom2A2ALU4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Shroom2A2ALU4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Shroom2A2ALU4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Shroom2A2ALU4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
Shroom2A2ALU4 Gm14767-201ENSMUST00000121559 586 ntBASIC25.21■■□□□ 1.63
Shroom2A2ALU4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Shroom2A2ALU4 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC25.21■■□□□ 1.63
Shroom2A2ALU4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Shroom2A2ALU4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Shroom2A2ALU4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
Shroom2A2ALU4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
Shroom2A2ALU4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Shroom2A2ALU4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Shroom2A2ALU4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
Shroom2A2ALU4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Shroom2A2ALU4 Gm12008-201ENSMUST00000117791 755 ntBASIC25.2■■□□□ 1.62
Shroom2A2ALU4 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Shroom2A2ALU4 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC25.2■■□□□ 1.62
Shroom2A2ALU4 Gm18246-201ENSMUST00000221023 728 ntBASIC25.2■■□□□ 1.62
Shroom2A2ALU4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Shroom2A2ALU4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Shroom2A2ALU4 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Shroom2A2ALU4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Shroom2A2ALU4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Shroom2A2ALU4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC25.19■■□□□ 1.62
Shroom2A2ALU4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Shroom2A2ALU4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC25.19■■□□□ 1.62
Shroom2A2ALU4 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Shroom2A2ALU4 Gm13517-201ENSMUST00000120782 1495 ntBASIC25.19■■□□□ 1.62
Shroom2A2ALU4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Shroom2A2ALU4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Shroom2A2ALU4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC25.18■■□□□ 1.62
Shroom2A2ALU4 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC25.18■■□□□ 1.62
Shroom2A2ALU4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Shroom2A2ALU4 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Shroom2A2ALU4 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Shroom2A2ALU4 Gm28630-201ENSMUST00000187806 498 ntBASIC25.18■■□□□ 1.62
Shroom2A2ALU4 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC25.18■■□□□ 1.62
Shroom2A2ALU4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Shroom2A2ALU4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Shroom2A2ALU4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Shroom2A2ALU4 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC25.17■■□□□ 1.62
Shroom2A2ALU4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
Shroom2A2ALU4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Shroom2A2ALU4 Gm8969-201ENSMUST00000199694 526 ntBASIC25.17■■□□□ 1.62
Shroom2A2ALU4 Gm9257-201ENSMUST00000221254 232 ntBASIC25.17■■□□□ 1.62
Shroom2A2ALU4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC25.17■■□□□ 1.62
Shroom2A2ALU4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Shroom2A2ALU4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Shroom2A2ALU4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Shroom2A2ALU4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Shroom2A2ALU4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Shroom2A2ALU4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Shroom2A2ALU4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Shroom2A2ALU4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Shroom2A2ALU4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC25.16■■□□□ 1.62
Shroom2A2ALU4 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Shroom2A2ALU4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Shroom2A2ALU4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC25.16■■□□□ 1.62
Shroom2A2ALU4 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Shroom2A2ALU4 Gm29541-201ENSMUST00000191351 678 ntBASIC25.16■■□□□ 1.62
Shroom2A2ALU4 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Shroom2A2ALU4 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Shroom2A2ALU4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms