Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcna-ps2A0A140T8V5 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcna-ps2A0A140T8V5 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Gm11355-201ENSMUST00000121120 306 ntBASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcna-ps2A0A140T8V5 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcna-ps2A0A140T8V5 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.16■□□□□ 0.18
Pcna-ps2A0A140T8V5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcna-ps2A0A140T8V5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcna-ps2A0A140T8V5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcna-ps2A0A140T8V5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcna-ps2A0A140T8V5 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcna-ps2A0A140T8V5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms