Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav13n-4A0A0G2JG01 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav13n-4A0A0G2JG01 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Trav13n-4A0A0G2JG01 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Gm6623-201ENSMUST00000173570 544 ntBASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-4A0A0G2JG01 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav13n-4A0A0G2JG01 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Mir3081-201ENSMUST00000175305 84 ntBASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms