Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav19A0A0B4J1K4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav19A0A0B4J1K4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Gm10698-201ENSMUST00000182663 604 ntBASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Timm23-208ENSMUST00000226683 750 ntBASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav19A0A0B4J1K4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Gm13186-201ENSMUST00000118031 316 ntBASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms