Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm13158-201ENSMUST00000122007 736 ntBASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm11249-201ENSMUST00000117071 859 ntBASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Il3ra-202ENSMUST00000223589 738 ntBASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv3A0A0A6YYE2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Phf7-203ENSMUST00000226565 1971 ntBASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.43□□□□□ -0.42
Trbv3A0A0A6YYE2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trbv3A0A0A6YYE2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms