Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trbv23A0A0A6YWQ1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Mir5122-201ENSMUST00000175004 89 ntBASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Gm38027-201ENSMUST00000192315 235 ntBASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv23A0A0A6YWQ1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv23A0A0A6YWQ1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv23A0A0A6YWQ1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv23A0A0A6YWQ1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv23A0A0A6YWQ1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trbv23A0A0A6YWQ1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv23A0A0A6YWQ1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv23A0A0A6YWQ1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv23A0A0A6YWQ1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv23A0A0A6YWQ1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv23A0A0A6YWQ1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.84□□□□□ -0.19
Trbv23A0A0A6YWQ1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.84□□□□□ -0.19
Trbv23A0A0A6YWQ1 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms