Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Il3ra-202ENSMUST00000223589 738 ntBASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Gm7791-201ENSMUST00000219066 539 ntBASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms