Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.11□□□□□ -2.07
LSM4Q9Y4Z0 AC010205.1-201ENST00000616668 449 ntBASIC2.11□□□□□ -2.07
LSM4Q9Y4Z0 RNA5SP393-201ENST00000363423 117 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 Y_RNA.158-201ENST00000363651 101 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 SNORD114-6-201ENST00000364393 72 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 SNORA67.1-201ENST00000364749 141 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 Y_RNA.424-201ENST00000384063 103 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 MIR518A2-201ENST00000384966 87 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 MIR524-201ENST00000385242 87 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 Y_RNA.645-201ENST00000391229 102 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 MRPL35P1-201ENST00000404272 572 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 MIR1185-2-201ENST00000408687 86 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 RNA5SP508-201ENST00000411327 119 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 SDAD1P3-201ENST00000427380 333 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 FCF1P4-201ENST00000448326 183 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 AC010469.2-201ENST00000496412 480 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 Y_RNA.721-201ENST00000517207 102 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 AC091544.4-201ENST00000555268 342 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 MIR5092-201ENST00000583139 88 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 AC104695.3-201ENST00000604052 296 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 AC240442.1-201ENST00000616055 283 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 AC130454.1-201ENST00000622948 401 ntBASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LSM4Q9Y4Z0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 AP006437.1-201ENST00000641440 3685 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 ZNF271P-202ENST00000465539 1970 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 MIR410-201ENST00000362222 80 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 RNU1-58P-201ENST00000362413 163 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 SNORA33.2-201ENST00000365413 134 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 RNU6-1264P-201ENST00000383891 107 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 MIR1261-201ENST00000408659 82 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 RPS12P2-201ENST00000439728 269 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 AC016717.1-201ENST00000448918 286 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 RNU6-107P-201ENST00000516643 102 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 RNU7-193P-201ENST00000516723 65 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 SNORA31.25-201ENST00000517242 134 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 AC040926.1-201ENST00000530195 238 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 AC009127.3-201ENST00000570531 403 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 MIR4659A-201ENST00000580269 81 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 MIR4635-201ENST00000583759 79 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 AC016925.2-201ENST00000605108 242 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 AL121655.1-201ENST00000605811 308 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 snoZ196.1-201ENST00000625269 89 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 U6.92-201ENST00000636464 89 ntBASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.09□□□□□ -2.07
LSM4Q9Y4Z0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.09□□□□□ -2.08
LSM4Q9Y4Z0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 RNA5SP432-201ENST00000362480 116 ntBASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 RNU6-859P-201ENST00000362728 107 ntBASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 SNORD115-3-201ENST00000363100 82 ntBASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 RNA5SP493-201ENST00000364115 91 ntBASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 RNU4-50P-201ENST00000364361 141 ntBASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 RNU1-112P-201ENST00000364401 164 ntBASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 Y_RNA.326-201ENST00000365176 113 ntBASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 Y_RNA.422-201ENST00000384054 114 ntBASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 RNU6-926P-201ENST00000384075 107 ntBASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 RNA5SP210-201ENST00000391034 120 ntBASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 AL138827.1-201ENST00000402666 306 ntBASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 AL513328.1-201ENST00000446460 224 ntBASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 RNU6-221P-201ENST00000459541 99 ntBASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 TRBV12-1-201ENST00000479785 344 ntBASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 RPL26P26-201ENST00000480251 434 ntBASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 HMGB3P3-201ENST00000510526 400 ntBASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 RNU6-856P-201ENST00000516959 98 ntBASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 AC022616.4-201ENST00000522985 181 ntBASIC2.08□□□□□ -2.08
LSM4Q9Y4Z0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
LSM4Q9Y4Z0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LSM4Q9Y4Z0 SNORA63-201ENST00000363450 132 ntBASIC2.07□□□□□ -2.08
LSM4Q9Y4Z0 RNU6-1310P-201ENST00000384153 107 ntBASIC2.07□□□□□ -2.08
LSM4Q9Y4Z0 Y_RNA.458-201ENST00000384240 102 ntBASIC2.07□□□□□ -2.08
LSM4Q9Y4Z0 SNORA51.11-201ENST00000384442 131 ntBASIC2.07□□□□□ -2.08
LSM4Q9Y4Z0 RNA5SP21-201ENST00000410917 96 ntBASIC2.07□□□□□ -2.08
LSM4Q9Y4Z0 TOMM22P2-201ENST00000430735 237 ntBASIC2.07□□□□□ -2.08
LSM4Q9Y4Z0 AL121890.1-201ENST00000435457 205 ntBASIC2.07□□□□□ -2.08
LSM4Q9Y4Z0 RNU6-625P-201ENST00000459412 107 ntBASIC2.07□□□□□ -2.08
LSM4Q9Y4Z0 RNU6-408P-201ENST00000515910 100 ntBASIC2.07□□□□□ -2.08
LSM4Q9Y4Z0 AP003072.1-201ENST00000531740 145 ntBASIC2.07□□□□□ -2.08
LSM4Q9Y4Z0 MIR3169-201ENST00000578032 83 ntBASIC2.07□□□□□ -2.08
LSM4Q9Y4Z0 AL390123.1-201ENST00000603216 237 ntBASIC2.07□□□□□ -2.08
LSM4Q9Y4Z0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.07□□□□□ -2.08
LSM4Q9Y4Z0 AL590240.4-201ENST00000616908 390 ntBASIC2.07□□□□□ -2.08
LSM4Q9Y4Z0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
LSM4Q9Y4Z0 RNA5SP68-201ENST00000363885 119 ntBASIC2.06□□□□□ -2.08
LSM4Q9Y4Z0 SNORA63.7-201ENST00000365579 123 ntBASIC2.06□□□□□ -2.08
LSM4Q9Y4Z0 RNU6-639P-201ENST00000384074 107 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms