Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 RNU6-1059P-201ENST00000363752 98 ntBASIC2.09□□□□□ -2.07
CCDC30Q5VVM6 RNU6-418P-201ENST00000384035 107 ntBASIC2.09□□□□□ -2.07
CCDC30Q5VVM6 Y_RNA.482-201ENST00000384377 111 ntBASIC2.09□□□□□ -2.07
CCDC30Q5VVM6 RNU6-541P-201ENST00000384709 110 ntBASIC2.09□□□□□ -2.07
CCDC30Q5VVM6 RNU6-159P-201ENST00000391080 106 ntBASIC2.09□□□□□ -2.07
CCDC30Q5VVM6 NCOR1P3-201ENST00000420479 303 ntBASIC2.09□□□□□ -2.07
CCDC30Q5VVM6 RPS3AP52-201ENST00000435639 297 ntBASIC2.09□□□□□ -2.07
CCDC30Q5VVM6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC30Q5VVM6 AC005668.1-201ENST00000571142 476 ntBASIC2.09□□□□□ -2.07
CCDC30Q5VVM6 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC30Q5VVM6 SNORD11B-201ENST00000607707 90 ntBASIC2.09□□□□□ -2.07
CCDC30Q5VVM6 AC006026.1-201ENST00000444025 1803 ntBASIC2.09□□□□□ -2.08
CCDC30Q5VVM6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
CCDC30Q5VVM6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
CCDC30Q5VVM6 MTND4P12-201ENST00000498999 1377 ntBASIC2.09□□□□□ -2.08
CCDC30Q5VVM6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC30Q5VVM6 Y_RNA.160-201ENST00000363677 92 ntBASIC2.08□□□□□ -2.08
CCDC30Q5VVM6 RNU6-1305P-201ENST00000364353 104 ntBASIC2.08□□□□□ -2.08
CCDC30Q5VVM6 MT-TL1-201ENST00000386347 75 ntBASIC2.08□□□□□ -2.08
CCDC30Q5VVM6 SNORA67.5-201ENST00000391036 107 ntBASIC2.08□□□□□ -2.08
CCDC30Q5VVM6 SNORA17.3-201ENST00000391159 129 ntBASIC2.08□□□□□ -2.08
CCDC30Q5VVM6 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC30Q5VVM6 RPL37P10-201ENST00000412884 288 ntBASIC2.08□□□□□ -2.08
CCDC30Q5VVM6 RPL31P63-201ENST00000422565 375 ntBASIC2.08□□□□□ -2.08
CCDC30Q5VVM6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC30Q5VVM6 RNU7-30P-201ENST00000516835 62 ntBASIC2.08□□□□□ -2.08
CCDC30Q5VVM6 MIR3122-201ENST00000577243 73 ntBASIC2.08□□□□□ -2.08
CCDC30Q5VVM6 AL078596.1-201ENST00000624856 447 ntBASIC2.08□□□□□ -2.08
CCDC30Q5VVM6 RNU6-1050P-201ENST00000410388 107 ntBASIC2.07□□□□□ -2.08
CCDC30Q5VVM6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.07□□□□□ -2.08
CCDC30Q5VVM6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC30Q5VVM6 NDUFB4P10-201ENST00000452541 359 ntBASIC2.07□□□□□ -2.08
CCDC30Q5VVM6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC30Q5VVM6 AC116353.2-201ENST00000505332 712 ntBASIC2.07□□□□□ -2.08
CCDC30Q5VVM6 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC30Q5VVM6 SNORA25.14-201ENST00000516481 132 ntBASIC2.07□□□□□ -2.08
CCDC30Q5VVM6 Y_RNA.708-201ENST00000516950 96 ntBASIC2.07□□□□□ -2.08
CCDC30Q5VVM6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC30Q5VVM6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC30Q5VVM6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC30Q5VVM6 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC30Q5VVM6 AC100812.1-201ENST00000607622 580 ntBASIC2.07□□□□□ -2.08
CCDC30Q5VVM6 uc_338.5-201ENST00000611839 155 ntBASIC2.07□□□□□ -2.08
CCDC30Q5VVM6 AC068205.3-201ENST00000636385 468 ntBASIC2.07□□□□□ -2.08
CCDC30Q5VVM6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC30Q5VVM6 RNU6-457P-201ENST00000363999 107 ntBASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 Y_RNA.405-201ENST00000383979 100 ntBASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 Y_RNA.451-201ENST00000384200 100 ntBASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 RNU6-601P-201ENST00000384540 107 ntBASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 Y_RNA.524-201ENST00000384564 100 ntBASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 Y_RNA.561-201ENST00000384694 100 ntBASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 Y_RNA.594-201ENST00000410373 140 ntBASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 RN7SKP101-201ENST00000411376 320 ntBASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 RPL21P111-201ENST00000418453 477 ntBASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 HMGB1P18-201ENST00000438801 619 ntBASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 AC011406.1-201ENST00000512440 370 ntBASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 Y_RNA.691-201ENST00000516611 103 ntBASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 CBX3P8-201ENST00000532412 525 ntBASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 AL121579.1-201ENST00000555129 305 ntBASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 MIR5701-3-201ENST00000578890 82 ntBASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 MIR5701-1-201ENST00000585138 82 ntBASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 MIR5701-2-201ENST00000615634 82 ntBASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 AC022306.2-201ENST00000617563 647 ntBASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC30Q5VVM6 RNU6-873P-201ENST00000363833 107 ntBASIC2.05□□□□□ -2.08
CCDC30Q5VVM6 RNU6-876P-201ENST00000391295 104 ntBASIC2.05□□□□□ -2.08
CCDC30Q5VVM6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC30Q5VVM6 AC060773.1-201ENST00000421698 310 ntBASIC2.05□□□□□ -2.08
CCDC30Q5VVM6 CST2P1-201ENST00000425770 87 ntBASIC2.05□□□□□ -2.08
CCDC30Q5VVM6 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC30Q5VVM6 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC30Q5VVM6 RNU7-57P-201ENST00000459540 60 ntBASIC2.05□□□□□ -2.08
CCDC30Q5VVM6 Y_RNA.706-201ENST00000516933 99 ntBASIC2.05□□□□□ -2.08
CCDC30Q5VVM6 SNORA44.1-201ENST00000517031 108 ntBASIC2.05□□□□□ -2.08
CCDC30Q5VVM6 GNAI2P1-201ENST00000541815 315 ntBASIC2.05□□□□□ -2.08
CCDC30Q5VVM6 MIR5094-201ENST00000578766 85 ntBASIC2.05□□□□□ -2.08
CCDC30Q5VVM6 AC069114.2-201ENST00000604699 304 ntBASIC2.05□□□□□ -2.08
CCDC30Q5VVM6 AC103810.8-201ENST00000607347 118 ntBASIC2.05□□□□□ -2.08
CCDC30Q5VVM6 AC099654.5-201ENST00000636479 350 ntBASIC2.05□□□□□ -2.08
CCDC30Q5VVM6 Y_RNA.88-201ENST00000363029 99 ntBASIC2.04□□□□□ -2.08
CCDC30Q5VVM6 RNU6-112P-201ENST00000363599 104 ntBASIC2.04□□□□□ -2.08
CCDC30Q5VVM6 AL117342.1-201ENST00000404861 406 ntBASIC2.04□□□□□ -2.08
CCDC30Q5VVM6 RNA5SP504-201ENST00000410676 117 ntBASIC2.04□□□□□ -2.08
CCDC30Q5VVM6 AC099677.2-201ENST00000436385 175 ntBASIC2.04□□□□□ -2.08
CCDC30Q5VVM6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC30Q5VVM6 PRDX4P1-201ENST00000507189 574 ntBASIC2.04□□□□□ -2.08
CCDC30Q5VVM6 RNU6-1114P-201ENST00000516022 107 ntBASIC2.04□□□□□ -2.08
CCDC30Q5VVM6 Y_RNA.670-201ENST00000516255 105 ntBASIC2.04□□□□□ -2.08
CCDC30Q5VVM6 RNU6-1146P-201ENST00000516282 102 ntBASIC2.04□□□□□ -2.08
CCDC30Q5VVM6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC30Q5VVM6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.04□□□□□ -2.08
CCDC30Q5VVM6 AC005899.2-201ENST00000584353 90 ntBASIC2.04□□□□□ -2.08
CCDC30Q5VVM6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC30Q5VVM6 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.04□□□□□ -2.08
CCDC30Q5VVM6 snoZ196.1-201ENST00000625269 89 ntBASIC2.04□□□□□ -2.08
CCDC30Q5VVM6 AC245060.5-201ENST00000610778 3293 ntBASIC2.04□□□□□ -2.08
CCDC30Q5VVM6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC30Q5VVM6 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms