Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.08□□□□□ -2.42
ABCA1O95477 AL512427.1-201ENST00000618593 349 ntBASIC-0.08□□□□□ -2.42
ABCA1O95477 RNA5SP264-201ENST00000363115 107 ntBASIC-0.08□□□□□ -2.42
ABCA1O95477 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.08□□□□□ -2.42
ABCA1O95477 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.08□□□□□ -2.42
ABCA1O95477 MTND3P17-201ENST00000416968 344 ntBASIC-0.08□□□□□ -2.42
ABCA1O95477 AC009237.7-201ENST00000447357 229 ntBASIC-0.08□□□□□ -2.42
ABCA1O95477 AC093850.1-201ENST00000454121 251 ntBASIC-0.08□□□□□ -2.42
ABCA1O95477 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.08□□□□□ -2.42
ABCA1O95477 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.08□□□□□ -2.42
ABCA1O95477 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
ABCA1O95477 AL139286.2-201ENST00000606838 396 ntBASIC-0.08□□□□□ -2.42
ABCA1O95477 AL136221.1-201ENST00000621449 509 ntBASIC-0.08□□□□□ -2.42
ABCA1O95477 AC131159.1-201ENST00000621854 213 ntBASIC-0.08□□□□□ -2.42
ABCA1O95477 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
ABCA1O95477 SNORD114-28-201ENST00000363610 72 ntBASIC-0.09□□□□□ -2.42
ABCA1O95477 RNU6-877P-201ENST00000383868 107 ntBASIC-0.09□□□□□ -2.42
ABCA1O95477 RNU6V-201ENST00000384105 107 ntBASIC-0.09□□□□□ -2.42
ABCA1O95477 RPS26P42-201ENST00000413485 326 ntBASIC-0.09□□□□□ -2.42
ABCA1O95477 AL162725.1-201ENST00000435405 301 ntBASIC-0.09□□□□□ -2.42
ABCA1O95477 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.09□□□□□ -2.42
ABCA1O95477 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.09□□□□□ -2.42
ABCA1O95477 AC011195.1-201ENST00000578177 177 ntBASIC-0.09□□□□□ -2.42
ABCA1O95477 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.09□□□□□ -2.42
ABCA1O95477 AL157786.1-207ENST00000627771 695 ntBASIC-0.09□□□□□ -2.42
ABCA1O95477 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
ABCA1O95477 SNORA2B-201ENST00000384583 137 ntBASIC-0.1□□□□□ -2.42
ABCA1O95477 MIR520G-201ENST00000385064 90 ntBASIC-0.1□□□□□ -2.42
ABCA1O95477 MIR520H-201ENST00000385126 88 ntBASIC-0.1□□□□□ -2.42
ABCA1O95477 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.42
ABCA1O95477 MIR1827-201ENST00000408549 66 ntBASIC-0.1□□□□□ -2.42
ABCA1O95477 PCNPP5-201ENST00000452246 481 ntBASIC-0.1□□□□□ -2.42
ABCA1O95477 AC117522.1-201ENST00000509821 380 ntBASIC-0.1□□□□□ -2.42
ABCA1O95477 RNU6-123P-201ENST00000516163 102 ntBASIC-0.1□□□□□ -2.42
ABCA1O95477 AC022784.5-201ENST00000522241 437 ntBASIC-0.1□□□□□ -2.42
ABCA1O95477 AC026371.1-201ENST00000551867 419 ntBASIC-0.1□□□□□ -2.42
ABCA1O95477 MIR544B-201ENST00000582372 78 ntBASIC-0.1□□□□□ -2.42
ABCA1O95477 AC091965.4-201ENST00000607691 587 ntBASIC-0.1□□□□□ -2.42
ABCA1O95477 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.1□□□□□ -2.42
ABCA1O95477 AL136317.1-201ENST00000612653 226 ntBASIC-0.1□□□□□ -2.42
ABCA1O95477 AC068880.4-201ENST00000623082 495 ntBASIC-0.1□□□□□ -2.42
ABCA1O95477 MIRLET7C-201ENST00000362160 84 ntBASIC-0.1□□□□□ -2.43
ABCA1O95477 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.1□□□□□ -2.43
ABCA1O95477 RNU6-190P-201ENST00000384154 102 ntBASIC-0.1□□□□□ -2.43
ABCA1O95477 RNU6-331P-201ENST00000384724 107 ntBASIC-0.1□□□□□ -2.43
ABCA1O95477 MIR938-201ENST00000401216 83 ntBASIC-0.1□□□□□ -2.43
ABCA1O95477 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.1□□□□□ -2.43
ABCA1O95477 NFU1P2-201ENST00000448700 469 ntBASIC-0.1□□□□□ -2.43
ABCA1O95477 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.1□□□□□ -2.43
ABCA1O95477 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.1□□□□□ -2.43
ABCA1O95477 AC093027.1-201ENST00000546698 429 ntBASIC-0.1□□□□□ -2.43
ABCA1O95477 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.1□□□□□ -2.43
ABCA1O95477 AC027288.2-201ENST00000553028 243 ntBASIC-0.1□□□□□ -2.43
ABCA1O95477 AC073539.2-201ENST00000597113 165 ntBASIC-0.1□□□□□ -2.43
ABCA1O95477 AL117336.2-201ENST00000602435 335 ntBASIC-0.1□□□□□ -2.43
ABCA1O95477 AC005776.1-201ENST00000603164 290 ntBASIC-0.1□□□□□ -2.43
ABCA1O95477 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.11□□□□□ -2.43
ABCA1O95477 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
ABCA1O95477 RNU6-545P-201ENST00000362681 104 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 RNY3P5-201ENST00000384127 102 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 RNU6-975P-201ENST00000384296 105 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 MIR562-201ENST00000384894 95 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 SNORD115.1-201ENST00000391109 76 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 SNX3P1X-201ENST00000414887 175 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 AL163973.1-201ENST00000484753 577 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 AC010469.2-201ENST00000496412 480 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 MTND4P4-201ENST00000439033 1366 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 SNORD118-201ENST00000363593 134 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 RNU6-245P-201ENST00000384020 107 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 SNORD41-201ENST00000386967 70 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 RNA5SP496-201ENST00000391240 109 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 AC090960.1-201ENST00000421072 306 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 AC007327.1-201ENST00000447461 264 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 AC074198.2-201ENST00000508153 258 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.11□□□□□ -2.43
ABCA1O95477 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.11□□□□□ -2.43
ABCA1O95477 MTATP6P9-201ENST00000515039 680 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 AC027419.1-201ENST00000522976 328 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.11□□□□□ -2.43
ABCA1O95477 AC008250.2-201ENST00000615261 205 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 AL163152.1-201ENST00000642001 374 ntBASIC-0.11□□□□□ -2.43
ABCA1O95477 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.12□□□□□ -2.43
ABCA1O95477 RNA5SP109-201ENST00000391010 116 ntBASIC-0.12□□□□□ -2.43
ABCA1O95477 SNORD71-201ENST00000411292 86 ntBASIC-0.12□□□□□ -2.43
ABCA1O95477 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
ABCA1O95477 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.12□□□□□ -2.43
ABCA1O95477 MTCO3P10-201ENST00000455912 772 ntBASIC-0.12□□□□□ -2.43
ABCA1O95477 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.12□□□□□ -2.43
ABCA1O95477 AC121334.2-201ENST00000605387 271 ntBASIC-0.12□□□□□ -2.43
ABCA1O95477 RNU6-1192P-201ENST00000612197 107 ntBASIC-0.12□□□□□ -2.43
ABCA1O95477 RNU6-489P-201ENST00000618289 107 ntBASIC-0.12□□□□□ -2.43
ABCA1O95477 AC068137.4-201ENST00000638485 296 ntBASIC-0.12□□□□□ -2.43
ABCA1O95477 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.12□□□□□ -2.43
ABCA1O95477 RNU6-621P-201ENST00000364752 109 ntBASIC-0.12□□□□□ -2.43
ABCA1O95477 RPS29P13-201ENST00000402041 169 ntBASIC-0.12□□□□□ -2.43
ABCA1O95477 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.12□□□□□ -2.43
ABCA1O95477 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.12□□□□□ -2.43
ABCA1O95477 AL133217.1-201ENST00000450980 425 ntBASIC-0.12□□□□□ -2.43
ABCA1O95477 AC104136.1-201ENST00000512969 394 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms