Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RNU7-159P-201ENST00000459284 62 ntBASIC-0.6□□□□□ -2.51
HMGN4O00479 snoU13.21-201ENST00000459368 105 ntBASIC-0.6□□□□□ -2.51
HMGN4O00479 RNU6-377P-201ENST00000515965 102 ntBASIC-0.6□□□□□ -2.51
HMGN4O00479 AC025647.1-201ENST00000517879 253 ntBASIC-0.6□□□□□ -2.51
HMGN4O00479 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.6□□□□□ -2.51
HMGN4O00479 MIR6755-201ENST00000619993 66 ntBASIC-0.6□□□□□ -2.51
HMGN4O00479 AP002782.1-201ENST00000623107 614 ntBASIC-0.6□□□□□ -2.51
HMGN4O00479 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
HMGN4O00479 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.61□□□□□ -2.51
HMGN4O00479 RNU6-371P-201ENST00000364283 108 ntBASIC-0.61□□□□□ -2.51
HMGN4O00479 MIR329-2-201ENST00000385029 84 ntBASIC-0.61□□□□□ -2.51
HMGN4O00479 AC008134.1-201ENST00000420943 193 ntBASIC-0.61□□□□□ -2.51
HMGN4O00479 USP9YP29-201ENST00000445112 563 ntBASIC-0.61□□□□□ -2.51
HMGN4O00479 AL392103.1-201ENST00000447000 198 ntBASIC-0.61□□□□□ -2.51
HMGN4O00479 HMGN2P26-201ENST00000463169 339 ntBASIC-0.61□□□□□ -2.51
HMGN4O00479 RNU7-41P-201ENST00000515917 61 ntBASIC-0.61□□□□□ -2.51
HMGN4O00479 RNU6-977P-201ENST00000516411 103 ntBASIC-0.61□□□□□ -2.51
HMGN4O00479 VN1R87P-201ENST00000596706 487 ntBASIC-0.61□□□□□ -2.51
HMGN4O00479 AL592221.1-201ENST00000605266 382 ntBASIC-0.61□□□□□ -2.51
HMGN4O00479 AL158032.1-201ENST00000605401 106 ntBASIC-0.61□□□□□ -2.51
HMGN4O00479 MIR8084-201ENST00000614105 89 ntBASIC-0.61□□□□□ -2.51
HMGN4O00479 MIR7111-201ENST00000619751 72 ntBASIC-0.61□□□□□ -2.51
HMGN4O00479 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
HMGN4O00479 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.62□□□□□ -2.51
HMGN4O00479 SNORD14C-201ENST00000365382 88 ntBASIC-0.62□□□□□ -2.51
HMGN4O00479 SNORD114-12-201ENST00000365400 75 ntBASIC-0.62□□□□□ -2.51
HMGN4O00479 MIR454-201ENST00000390180 115 ntBASIC-0.62□□□□□ -2.51
HMGN4O00479 RNU6-269P-201ENST00000391077 97 ntBASIC-0.62□□□□□ -2.51
HMGN4O00479 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.62□□□□□ -2.51
HMGN4O00479 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.62□□□□□ -2.51
HMGN4O00479 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.62□□□□□ -2.51
HMGN4O00479 RNU7-57P-201ENST00000459540 60 ntBASIC-0.62□□□□□ -2.51
HMGN4O00479 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.62□□□□□ -2.51
HMGN4O00479 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.62□□□□□ -2.51
HMGN4O00479 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.62□□□□□ -2.51
HMGN4O00479 ADI1P3-201ENST00000549509 470 ntBASIC-0.62□□□□□ -2.51
HMGN4O00479 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.62□□□□□ -2.51
HMGN4O00479 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.62□□□□□ -2.51
HMGN4O00479 AC016911.1-201ENST00000613297 452 ntBASIC-0.62□□□□□ -2.51
HMGN4O00479 AC005562.2-201ENST00000618264 111 ntBASIC-0.62□□□□□ -2.51
HMGN4O00479 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.63□□□□□ -2.51
HMGN4O00479 RNA5SP48-201ENST00000363969 126 ntBASIC-0.63□□□□□ -2.51
HMGN4O00479 RNU6-925P-201ENST00000384629 104 ntBASIC-0.63□□□□□ -2.51
HMGN4O00479 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.63□□□□□ -2.51
HMGN4O00479 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.63□□□□□ -2.51
HMGN4O00479 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.63□□□□□ -2.51
HMGN4O00479 RNU7-165P-201ENST00000458864 60 ntBASIC-0.63□□□□□ -2.51
HMGN4O00479 AC008628.2-201ENST00000502605 298 ntBASIC-0.63□□□□□ -2.51
HMGN4O00479 AC107401.1-201ENST00000503426 685 ntBASIC-0.63□□□□□ -2.51
HMGN4O00479 RNU2-10P-201ENST00000516375 211 ntBASIC-0.63□□□□□ -2.51
HMGN4O00479 RNU6-551P-201ENST00000516661 103 ntBASIC-0.63□□□□□ -2.51
HMGN4O00479 RNU7-28P-201ENST00000516759 62 ntBASIC-0.63□□□□□ -2.51
HMGN4O00479 AP001372.4-201ENST00000524889 472 ntBASIC-0.63□□□□□ -2.51
HMGN4O00479 AC013828.2-201ENST00000532487 235 ntBASIC-0.63□□□□□ -2.51
HMGN4O00479 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.63□□□□□ -2.51
HMGN4O00479 AC006157.1-201ENST00000611750 366 ntBASIC-0.63□□□□□ -2.51
HMGN4O00479 AC008250.2-201ENST00000615261 205 ntBASIC-0.63□□□□□ -2.51
HMGN4O00479 MIR6779-201ENST00000617283 64 ntBASIC-0.63□□□□□ -2.51
HMGN4O00479 U6.73-201ENST00000619194 103 ntBASIC-0.63□□□□□ -2.51
HMGN4O00479 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.63□□□□□ -2.51
HMGN4O00479 MIRLET7C-201ENST00000362160 84 ntBASIC-0.64□□□□□ -2.51
HMGN4O00479 RNU6-336P-201ENST00000364891 107 ntBASIC-0.64□□□□□ -2.51
HMGN4O00479 SNORA36A-201ENST00000384221 132 ntBASIC-0.64□□□□□ -2.51
HMGN4O00479 MIR586-201ENST00000385035 97 ntBASIC-0.64□□□□□ -2.51
HMGN4O00479 MIR1284-201ENST00000408337 120 ntBASIC-0.64□□□□□ -2.51
HMGN4O00479 SNORD100-201ENST00000408573 76 ntBASIC-0.64□□□□□ -2.51
HMGN4O00479 RNU6-613P-201ENST00000410412 108 ntBASIC-0.64□□□□□ -2.51
HMGN4O00479 RNU4-46P-201ENST00000410818 138 ntBASIC-0.64□□□□□ -2.51
HMGN4O00479 AC012306.1-201ENST00000423267 114 ntBASIC-0.64□□□□□ -2.51
HMGN4O00479 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.64□□□□□ -2.51
HMGN4O00479 MRPS36P4-201ENST00000534436 298 ntBASIC-0.64□□□□□ -2.51
HMGN4O00479 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.64□□□□□ -2.51
HMGN4O00479 AC068790.2-201ENST00000602601 557 ntBASIC-0.64□□□□□ -2.51
HMGN4O00479 OR4H6P-202ENST00000603819 340 ntBASIC-0.64□□□□□ -2.51
HMGN4O00479 AC026741.1-201ENST00000605892 482 ntBASIC-0.64□□□□□ -2.51
HMGN4O00479 AC092574.1-201ENST00000609771 420 ntBASIC-0.64□□□□□ -2.51
HMGN4O00479 MIR548AZ-201ENST00000616567 95 ntBASIC-0.64□□□□□ -2.51
HMGN4O00479 AC093875.1-201ENST00000623688 504 ntBASIC-0.64□□□□□ -2.51
HMGN4O00479 snoZ196.1-201ENST00000625269 89 ntBASIC-0.64□□□□□ -2.51
HMGN4O00479 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.65□□□□□ -2.51
HMGN4O00479 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.65□□□□□ -2.51
HMGN4O00479 RNU6-207P-201ENST00000384137 107 ntBASIC-0.65□□□□□ -2.51
HMGN4O00479 SNORA32.3-201ENST00000384772 121 ntBASIC-0.65□□□□□ -2.51
HMGN4O00479 MIR520C-201ENST00000385005 87 ntBASIC-0.65□□□□□ -2.51
HMGN4O00479 MIR1302-7-201ENST00000408841 72 ntBASIC-0.65□□□□□ -2.51
HMGN4O00479 RNA5SP95-201ENST00000410319 137 ntBASIC-0.65□□□□□ -2.51
HMGN4O00479 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.65□□□□□ -2.51
HMGN4O00479 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.65□□□□□ -2.51
HMGN4O00479 MTND1P32-201ENST00000433043 938 ntBASIC-0.65□□□□□ -2.51
HMGN4O00479 SNAP23P1-201ENST00000433229 246 ntBASIC-0.65□□□□□ -2.51
HMGN4O00479 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.65□□□□□ -2.51
HMGN4O00479 AC004386.2-201ENST00000441858 148 ntBASIC-0.65□□□□□ -2.51
HMGN4O00479 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.65□□□□□ -2.51
HMGN4O00479 SNORD126-201ENST00000459475 77 ntBASIC-0.65□□□□□ -2.51
HMGN4O00479 AC109479.2-201ENST00000517842 174 ntBASIC-0.65□□□□□ -2.51
HMGN4O00479 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.65□□□□□ -2.51
HMGN4O00479 AC093027.1-201ENST00000546698 429 ntBASIC-0.65□□□□□ -2.51
HMGN4O00479 MIR5692A1-201ENST00000580523 69 ntBASIC-0.65□□□□□ -2.51
HMGN4O00479 AC144521.1-201ENST00000607148 956 ntBASIC-0.65□□□□□ -2.51
HMGN4O00479 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms