Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 RPL23AP63-201ENST00000498752 471 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 SNORA31.15-201ENST00000516771 132 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 AP003072.1-201ENST00000531740 145 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 EIF4A1P12-201ENST00000551910 141 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 Y_RNA.812-201ENST00000610788 101 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 Y_RNA.784-201ENST00000613803 101 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 Y_RNA.787-201ENST00000616522 101 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 AC007485.1-201ENST00000616755 206 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 Y_RNA.780-201ENST00000617336 101 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 Y_RNA.801-201ENST00000619005 101 ntBASIC2.77□□□□□ -1.97
KRT28Q7Z3Y7 MTND5P16-201ENST00000460269 1703 ntBASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 Y_RNA.216-201ENST00000364205 93 ntBASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 RNA5SP240-201ENST00000365355 128 ntBASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 SNORA22B-201ENST00000383876 138 ntBASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 RNY1P14-201ENST00000384426 108 ntBASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 MIR487A-201ENST00000385009 80 ntBASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 MIR628-201ENST00000385229 95 ntBASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 MIR518E-201ENST00000385252 88 ntBASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 AL590004.1-201ENST00000405321 300 ntBASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 RNA5SP201-201ENST00000410316 124 ntBASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 MCFD2P1-201ENST00000417812 300 ntBASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 AC096644.2-201ENST00000429278 159 ntBASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 AC090616.3-201ENST00000582184 217 ntBASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 MIR8070-201ENST00000616510 88 ntBASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 AC087588.2-201ENST00000617667 426 ntBASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.76□□□□□ -1.97
KRT28Q7Z3Y7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 RNA5SP393-201ENST00000363423 117 ntBASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 Y_RNA.148-201ENST00000363557 117 ntBASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 SNORD115-8-201ENST00000363856 82 ntBASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 SNORD115-38-201ENST00000365037 82 ntBASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 RNU6-1274P-201ENST00000384557 107 ntBASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 SNORA12-201ENST00000391162 147 ntBASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 MIR320B2-201ENST00000408479 138 ntBASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 AL161788.1-201ENST00000441805 169 ntBASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 SNORA25.10-201ENST00000515926 124 ntBASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 RNA5SP54-201ENST00000516951 92 ntBASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 RNU6-58P-201ENST00000517143 103 ntBASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 HSBP1P1-201ENST00000555205 166 ntBASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 AL355297.2-201ENST00000604792 129 ntBASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 AC016925.2-201ENST00000605108 242 ntBASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 AL132822.1-201ENST00000617063 513 ntBASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRT28Q7Z3Y7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 RNU6-222P-201ENST00000362438 107 ntBASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 Y_RNA.116-201ENST00000363292 103 ntBASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 RNU6-457P-201ENST00000363999 107 ntBASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 RNU4-42P-201ENST00000364738 142 ntBASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 SNORA33.2-201ENST00000365413 134 ntBASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 MIR7-2-201ENST00000384970 110 ntBASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 AC027124.2-201ENST00000428249 105 ntBASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 AL445305.1-201ENST00000432577 575 ntBASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 AL160004.2-201ENST00000432935 350 ntBASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 CHEK2P4-201ENST00000450340 246 ntBASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 AP000870.1-201ENST00000472927 406 ntBASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 SCARNA15.1-201ENST00000516384 125 ntBASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 RPPH1-2P-201ENST00000516688 293 ntBASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 RNU4-77P-201ENST00000516692 156 ntBASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 AC090517.1-201ENST00000569307 266 ntBASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 AC090617.3-201ENST00000573670 475 ntBASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 MIR5194-201ENST00000582634 120 ntBASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 AC010297.1-201ENST00000623948 149 ntBASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 ZNF204P-201ENST00000416749 2397 ntBASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
KRT28Q7Z3Y7 RNU6-137P-201ENST00000363680 108 ntBASIC2.73□□□□□ -1.97
KRT28Q7Z3Y7 RNU1-138P-201ENST00000384093 164 ntBASIC2.73□□□□□ -1.97
KRT28Q7Z3Y7 MIR549A-201ENST00000385268 96 ntBASIC2.73□□□□□ -1.97
KRT28Q7Z3Y7 Y_RNA.592-201ENST00000410274 109 ntBASIC2.73□□□□□ -1.97
KRT28Q7Z3Y7 AL445685.2-201ENST00000422551 342 ntBASIC2.73□□□□□ -1.97
KRT28Q7Z3Y7 WARS2P1-201ENST00000429678 537 ntBASIC2.73□□□□□ -1.97
KRT28Q7Z3Y7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.73□□□□□ -1.97
KRT28Q7Z3Y7 RNU6-475P-201ENST00000516073 104 ntBASIC2.73□□□□□ -1.97
KRT28Q7Z3Y7 AC022868.1-201ENST00000517767 391 ntBASIC2.73□□□□□ -1.97
KRT28Q7Z3Y7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.73□□□□□ -1.97
KRT28Q7Z3Y7 AC027288.2-201ENST00000553028 243 ntBASIC2.73□□□□□ -1.97
KRT28Q7Z3Y7 AC006600.1-201ENST00000572529 153 ntBASIC2.73□□□□□ -1.97
KRT28Q7Z3Y7 AC016727.2-201ENST00000603988 621 ntBASIC2.73□□□□□ -1.97
KRT28Q7Z3Y7 SNRPGP20-201ENST00000604477 205 ntBASIC2.73□□□□□ -1.97
KRT28Q7Z3Y7 AL049779.4-201ENST00000604500 156 ntBASIC2.73□□□□□ -1.97
KRT28Q7Z3Y7 AC040896.1-201ENST00000613819 479 ntBASIC2.73□□□□□ -1.97
KRT28Q7Z3Y7 AL449363.1-201ENST00000617815 186 ntBASIC2.73□□□□□ -1.97
KRT28Q7Z3Y7 U2.1-201ENST00000618978 145 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms