Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 SNORA26-201ENST00000391286 122 ntBASIC-1.49□□□□□ -2.65
TFF3Q07654 MIR873-201ENST00000401120 77 ntBASIC-1.49□□□□□ -2.65
TFF3Q07654 AC013262.1-201ENST00000426710 252 ntBASIC-1.49□□□□□ -2.65
TFF3Q07654 AC010531.2-201ENST00000465012 153 ntBASIC-1.49□□□□□ -2.65
TFF3Q07654 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-1.49□□□□□ -2.65
TFF3Q07654 AL391840.1-201ENST00000571144 367 ntBASIC-1.49□□□□□ -2.65
TFF3Q07654 SNORA59B-202ENST00000578183 701 ntBASIC-1.49□□□□□ -2.65
TFF3Q07654 MIR4499-201ENST00000584834 69 ntBASIC-1.49□□□□□ -2.65
TFF3Q07654 AL158211.4-201ENST00000606988 584 ntBASIC-1.49□□□□□ -2.65
TFF3Q07654 MIR7107-201ENST00000611489 80 ntBASIC-1.49□□□□□ -2.65
TFF3Q07654 AL159153.1-201ENST00000619688 317 ntBASIC-1.49□□□□□ -2.65
TFF3Q07654 SNORA51.10-201ENST00000384418 136 ntBASIC-1.5□□□□□ -2.65
TFF3Q07654 AC006366.1-201ENST00000422002 759 ntBASIC-1.5□□□□□ -2.65
TFF3Q07654 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-1.5□□□□□ -2.65
TFF3Q07654 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.5□□□□□ -2.65
TFF3Q07654 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.5□□□□□ -2.65
TFF3Q07654 AC010424.1-201ENST00000506336 297 ntBASIC-1.5□□□□□ -2.65
TFF3Q07654 RNU6-977P-201ENST00000516411 103 ntBASIC-1.5□□□□□ -2.65
TFF3Q07654 SNORA18.7-201ENST00000516910 131 ntBASIC-1.5□□□□□ -2.65
TFF3Q07654 AP003168.1-201ENST00000530091 307 ntBASIC-1.5□□□□□ -2.65
TFF3Q07654 SEC63P2-201ENST00000503863 1939 ntBASIC-1.5□□□□□ -2.65
TFF3Q07654 RNU6-212P-201ENST00000362642 104 ntBASIC-1.51□□□□□ -2.65
TFF3Q07654 RNU6-1141P-201ENST00000364520 107 ntBASIC-1.51□□□□□ -2.65
TFF3Q07654 SNORA26.3-201ENST00000391119 136 ntBASIC-1.51□□□□□ -2.65
TFF3Q07654 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.51□□□□□ -2.65
TFF3Q07654 FCF1P9-201ENST00000412546 282 ntBASIC-1.51□□□□□ -2.65
TFF3Q07654 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-1.51□□□□□ -2.65
TFF3Q07654 AC021146.9-201ENST00000512503 156 ntBASIC-1.51□□□□□ -2.65
TFF3Q07654 MIR4306-201ENST00000583390 91 ntBASIC-1.51□□□□□ -2.65
TFF3Q07654 AL136363.2-201ENST00000604173 851 ntBASIC-1.51□□□□□ -2.65
TFF3Q07654 AC007684.1-201ENST00000609671 477 ntBASIC-1.51□□□□□ -2.65
TFF3Q07654 AC122133.1-201ENST00000613964 233 ntBASIC-1.51□□□□□ -2.65
TFF3Q07654 MIR7844-201ENST00000616161 122 ntBASIC-1.51□□□□□ -2.65
TFF3Q07654 SNORD115-2-201ENST00000362842 82 ntBASIC-1.52□□□□□ -2.65
TFF3Q07654 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.52□□□□□ -2.65
TFF3Q07654 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.52□□□□□ -2.65
TFF3Q07654 AC244250.2-201ENST00000418731 148 ntBASIC-1.52□□□□□ -2.65
TFF3Q07654 RNU5F-2P-201ENST00000516066 82 ntBASIC-1.52□□□□□ -2.65
TFF3Q07654 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.52□□□□□ -2.65
TFF3Q07654 RNU6-706P-201ENST00000517229 104 ntBASIC-1.52□□□□□ -2.65
TFF3Q07654 AL162424.1-201ENST00000602325 221 ntBASIC-1.52□□□□□ -2.65
TFF3Q07654 AC245008.1-201ENST00000608123 476 ntBASIC-1.52□□□□□ -2.65
TFF3Q07654 MIR8054-201ENST00000620877 86 ntBASIC-1.52□□□□□ -2.65
TFF3Q07654 RNU1-76P-201ENST00000362903 159 ntBASIC-1.53□□□□□ -2.65
TFF3Q07654 RNA5SP390-201ENST00000410191 113 ntBASIC-1.53□□□□□ -2.65
TFF3Q07654 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-1.53□□□□□ -2.65
TFF3Q07654 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-1.53□□□□□ -2.65
TFF3Q07654 AC007000.2-201ENST00000442564 487 ntBASIC-1.53□□□□□ -2.65
TFF3Q07654 AL606517.2-201ENST00000442855 241 ntBASIC-1.53□□□□□ -2.65
TFF3Q07654 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-1.53□□□□□ -2.65
TFF3Q07654 UBE2Q2P8-201ENST00000560644 102 ntBASIC-1.53□□□□□ -2.65
TFF3Q07654 AL663109.1-201ENST00000411498 844 ntBASIC-1.54□□□□□ -2.66
TFF3Q07654 RPL21P38-201ENST00000418090 167 ntBASIC-1.54□□□□□ -2.66
TFF3Q07654 DPRXP1-201ENST00000426312 460 ntBASIC-1.54□□□□□ -2.66
TFF3Q07654 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-1.54□□□□□ -2.66
TFF3Q07654 RPS23P5-201ENST00000495419 428 ntBASIC-1.54□□□□□ -2.66
TFF3Q07654 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.54□□□□□ -2.66
TFF3Q07654 MIR4804-201ENST00000581683 73 ntBASIC-1.54□□□□□ -2.66
TFF3Q07654 MIR548AD-201ENST00000584780 82 ntBASIC-1.54□□□□□ -2.66
TFF3Q07654 AC078795.3-201ENST00000602913 472 ntBASIC-1.54□□□□□ -2.66
TFF3Q07654 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-1.54□□□□□ -2.66
TFF3Q07654 AP000484.1-201ENST00000620067 1252 ntBASIC-1.54□□□□□ -2.66
TFF3Q07654 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-1.55□□□□□ -2.66
TFF3Q07654 SNORA33-201ENST00000363664 130 ntBASIC-1.55□□□□□ -2.66
TFF3Q07654 RNU4-36P-201ENST00000364294 144 ntBASIC-1.55□□□□□ -2.66
TFF3Q07654 U8.5-201ENST00000364528 136 ntBASIC-1.55□□□□□ -2.66
TFF3Q07654 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.55□□□□□ -2.66
TFF3Q07654 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-1.55□□□□□ -2.66
TFF3Q07654 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-1.55□□□□□ -2.66
TFF3Q07654 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-1.55□□□□□ -2.66
TFF3Q07654 LAMTOR3P2-201ENST00000504479 232 ntBASIC-1.55□□□□□ -2.66
TFF3Q07654 MTCO3P27-201ENST00000514397 196 ntBASIC-1.55□□□□□ -2.66
TFF3Q07654 Z99289.3-201ENST00000605586 594 ntBASIC-1.55□□□□□ -2.66
TFF3Q07654 FRG1KP-201ENST00000623592 341 ntBASIC-1.55□□□□□ -2.66
TFF3Q07654 Y_RNA.168-201ENST00000363740 102 ntBASIC-1.56□□□□□ -2.66
TFF3Q07654 SNORD31B-201ENST00000364977 69 ntBASIC-1.56□□□□□ -2.66
TFF3Q07654 SNORA2B-201ENST00000384583 137 ntBASIC-1.56□□□□□ -2.66
TFF3Q07654 RPS20P2-201ENST00000402520 389 ntBASIC-1.56□□□□□ -2.66
TFF3Q07654 AC019178.2-201ENST00000423595 505 ntBASIC-1.56□□□□□ -2.66
TFF3Q07654 HSFY5P-201ENST00000453726 309 ntBASIC-1.56□□□□□ -2.66
TFF3Q07654 AP000870.1-201ENST00000472927 406 ntBASIC-1.56□□□□□ -2.66
TFF3Q07654 TMEM251P1-201ENST00000503717 318 ntBASIC-1.56□□□□□ -2.66
TFF3Q07654 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-1.56□□□□□ -2.66
TFF3Q07654 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-1.56□□□□□ -2.66
TFF3Q07654 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.56□□□□□ -2.66
TFF3Q07654 AC092656.1-203ENST00000624134 423 ntBASIC-1.56□□□□□ -2.66
TFF3Q07654 AL590396.2-201ENST00000636511 1041 ntBASIC-1.56□□□□□ -2.66
TFF3Q07654 RNU6-543P-201ENST00000362576 108 ntBASIC-1.57□□□□□ -2.66
TFF3Q07654 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.57□□□□□ -2.66
TFF3Q07654 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.57□□□□□ -2.66
TFF3Q07654 MIR501-201ENST00000390204 84 ntBASIC-1.57□□□□□ -2.66
TFF3Q07654 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-1.57□□□□□ -2.66
TFF3Q07654 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.57□□□□□ -2.66
TFF3Q07654 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-1.57□□□□□ -2.66
TFF3Q07654 RNU6-63P-201ENST00000516690 95 ntBASIC-1.57□□□□□ -2.66
TFF3Q07654 AC133485.4-201ENST00000561835 220 ntBASIC-1.57□□□□□ -2.66
TFF3Q07654 AC090897.1-201ENST00000580909 226 ntBASIC-1.57□□□□□ -2.66
TFF3Q07654 AC011451.2-201ENST00000604303 598 ntBASIC-1.57□□□□□ -2.66
TFF3Q07654 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-1.57□□□□□ -2.66
TFF3Q07654 SCARNA4-201ENST00000629045 128 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms