Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.67□□□□□ -1.82
PRPF40AO75400 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRPF40AO75400 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRPF40AO75400 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRPF40AO75400 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
PRPF40AO75400 RNU1-33P-201ENST00000364249 162 ntBASIC3.67□□□□□ -1.82
PRPF40AO75400 RNY4P28-201ENST00000365281 93 ntBASIC3.67□□□□□ -1.82
PRPF40AO75400 MIR1283-1-201ENST00000408494 87 ntBASIC3.67□□□□□ -1.82
PRPF40AO75400 AC114982.1-201ENST00000469402 321 ntBASIC3.67□□□□□ -1.82
PRPF40AO75400 RNU6-436P-201ENST00000516171 114 ntBASIC3.67□□□□□ -1.82
PRPF40AO75400 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.67□□□□□ -1.82
PRPF40AO75400 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.67□□□□□ -1.82
PRPF40AO75400 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.67□□□□□ -1.82
PRPF40AO75400 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRPF40AO75400 AC080128.1-201ENST00000474389 1917 ntBASIC3.67□□□□□ -1.82
PRPF40AO75400 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.67□□□□□ -1.82
PRPF40AO75400 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PRPF40AO75400 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
PRPF40AO75400 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
PRPF40AO75400 RNU6-545P-201ENST00000362681 104 ntBASIC3.66□□□□□ -1.82
PRPF40AO75400 Y_RNA.270-201ENST00000364693 104 ntBASIC3.66□□□□□ -1.82
PRPF40AO75400 FO393413.1-201ENST00000402892 195 ntBASIC3.66□□□□□ -1.82
PRPF40AO75400 AL139281.1-201ENST00000422120 335 ntBASIC3.66□□□□□ -1.82
PRPF40AO75400 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.66□□□□□ -1.82
PRPF40AO75400 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.66□□□□□ -1.82
PRPF40AO75400 AC090515.1-201ENST00000465295 476 ntBASIC3.66□□□□□ -1.82
PRPF40AO75400 HMGN2P9-201ENST00000476875 229 ntBASIC3.66□□□□□ -1.82
PRPF40AO75400 AC006483.1-201ENST00000487308 313 ntBASIC3.66□□□□□ -1.82
PRPF40AO75400 AC023141.11-201ENST00000508864 202 ntBASIC3.66□□□□□ -1.82
PRPF40AO75400 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.66□□□□□ -1.82
PRPF40AO75400 MIR4282-201ENST00000583613 67 ntBASIC3.66□□□□□ -1.82
PRPF40AO75400 AC010620.2-201ENST00000600135 313 ntBASIC3.66□□□□□ -1.82
PRPF40AO75400 AC073349.3-201ENST00000617616 186 ntBASIC3.66□□□□□ -1.82
PRPF40AO75400 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.66□□□□□ -1.82
PRPF40AO75400 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRPF40AO75400 Z82209.1-201ENST00000422141 2135 ntBASIC3.65□□□□□ -1.82
PRPF40AO75400 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PRPF40AO75400 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
PRPF40AO75400 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PRPF40AO75400 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
PRPF40AO75400 Y_RNA.217-201ENST00000364214 105 ntBASIC3.65□□□□□ -1.83
PRPF40AO75400 AL031003.1-201ENST00000404229 172 ntBASIC3.65□□□□□ -1.83
PRPF40AO75400 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.65□□□□□ -1.83
PRPF40AO75400 CYP2C59P-201ENST00000457790 269 ntBASIC3.65□□□□□ -1.83
PRPF40AO75400 Y_RNA.641-201ENST00000459414 105 ntBASIC3.65□□□□□ -1.83
PRPF40AO75400 RN7SL601P-201ENST00000471221 293 ntBASIC3.65□□□□□ -1.83
PRPF40AO75400 RN7SKP43-201ENST00000516173 320 ntBASIC3.65□□□□□ -1.83
PRPF40AO75400 AC109329.2-201ENST00000519658 482 ntBASIC3.65□□□□□ -1.83
PRPF40AO75400 Z83818.1-201ENST00000603584 150 ntBASIC3.65□□□□□ -1.83
PRPF40AO75400 AL161756.2-201ENST00000604597 246 ntBASIC3.65□□□□□ -1.83
PRPF40AO75400 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.65□□□□□ -1.83
PRPF40AO75400 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.65□□□□□ -1.83
PRPF40AO75400 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PRPF40AO75400 AC073346.2-201ENST00000624724 2058 ntBASIC3.64□□□□□ -1.83
PRPF40AO75400 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
PRPF40AO75400 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
PRPF40AO75400 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.64□□□□□ -1.83
PRPF40AO75400 SNORD115-30-201ENST00000364117 82 ntBASIC3.64□□□□□ -1.83
PRPF40AO75400 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.64□□□□□ -1.83
PRPF40AO75400 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.64□□□□□ -1.83
PRPF40AO75400 AC080013.2-201ENST00000460866 323 ntBASIC3.64□□□□□ -1.83
PRPF40AO75400 RPS29P2-201ENST00000479278 136 ntBASIC3.64□□□□□ -1.83
PRPF40AO75400 AP002392.1-201ENST00000537692 208 ntBASIC3.64□□□□□ -1.83
PRPF40AO75400 AC018630.3-201ENST00000542637 96 ntBASIC3.64□□□□□ -1.83
PRPF40AO75400 Z83843.1-201ENST00000604070 3685 ntBASIC3.64□□□□□ -1.83
PRPF40AO75400 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PRPF40AO75400 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
PRPF40AO75400 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PRPF40AO75400 Y_RNA.555-201ENST00000384673 110 ntBASIC3.63□□□□□ -1.83
PRPF40AO75400 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.63□□□□□ -1.83
PRPF40AO75400 BX510359.1-201ENST00000456973 237 ntBASIC3.63□□□□□ -1.83
PRPF40AO75400 SNORD2.1-201ENST00000458762 69 ntBASIC3.63□□□□□ -1.83
PRPF40AO75400 RNU6-965P-201ENST00000516721 96 ntBASIC3.63□□□□□ -1.83
PRPF40AO75400 CBX3P4-201ENST00000538909 354 ntBASIC3.63□□□□□ -1.83
PRPF40AO75400 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
PRPF40AO75400 AC009127.3-201ENST00000570531 403 ntBASIC3.63□□□□□ -1.83
PRPF40AO75400 MIR2682-201ENST00000580305 110 ntBASIC3.63□□□□□ -1.83
PRPF40AO75400 MIR4276-201ENST00000584832 70 ntBASIC3.63□□□□□ -1.83
PRPF40AO75400 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
PRPF40AO75400 uc_338.25-201ENST00000613756 156 ntBASIC3.63□□□□□ -1.83
PRPF40AO75400 FTX_2.1-201ENST00000618816 94 ntBASIC3.63□□□□□ -1.83
PRPF40AO75400 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.63□□□□□ -1.83
PRPF40AO75400 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
PRPF40AO75400 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.63□□□□□ -1.83
PRPF40AO75400 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRPF40AO75400 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRPF40AO75400 RNU6-1020P-201ENST00000363684 107 ntBASIC3.62□□□□□ -1.83
PRPF40AO75400 Y_RNA.243-201ENST00000364481 109 ntBASIC3.62□□□□□ -1.83
PRPF40AO75400 RNU6-710P-201ENST00000410424 105 ntBASIC3.62□□□□□ -1.83
PRPF40AO75400 BTF3P11-201ENST00000426582 477 ntBASIC3.62□□□□□ -1.83
PRPF40AO75400 RPL23AP83-201ENST00000434984 473 ntBASIC3.62□□□□□ -1.83
PRPF40AO75400 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.62□□□□□ -1.83
PRPF40AO75400 RNU7-57P-201ENST00000459540 60 ntBASIC3.62□□□□□ -1.83
PRPF40AO75400 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.62□□□□□ -1.83
PRPF40AO75400 SNORA70.24-201ENST00000517233 118 ntBASIC3.62□□□□□ -1.83
PRPF40AO75400 AP005660.1-201ENST00000522972 293 ntBASIC3.62□□□□□ -1.83
PRPF40AO75400 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.62□□□□□ -1.83
PRPF40AO75400 U6.115-201ENST00000636045 103 ntBASIC3.62□□□□□ -1.83
PRPF40AO75400 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.62□□□□□ -1.83
PRPF40AO75400 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms