Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RN7SKP49-201ENST00000516675 260 ntBASIC2.78□□□□□ -1.96
PRPF3O43395 RNU1-104P-201ENST00000517280 175 ntBASIC2.78□□□□□ -1.96
PRPF3O43395 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PRPF3O43395 AC006600.1-201ENST00000572529 153 ntBASIC2.78□□□□□ -1.96
PRPF3O43395 MIR5695-201ENST00000579717 85 ntBASIC2.78□□□□□ -1.96
PRPF3O43395 AC016925.2-201ENST00000605108 242 ntBASIC2.78□□□□□ -1.96
PRPF3O43395 AC067747.1-201ENST00000608026 250 ntBASIC2.78□□□□□ -1.96
PRPF3O43395 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.78□□□□□ -1.96
PRPF3O43395 AC007742.2-201ENST00000618226 398 ntBASIC2.78□□□□□ -1.96
PRPF3O43395 MIR1291-201ENST00000627649 87 ntBASIC2.78□□□□□ -1.96
PRPF3O43395 MIR203B-201ENST00000636080 86 ntBASIC2.78□□□□□ -1.96
PRPF3O43395 IGHVIII-44-202ENST00000636235 289 ntBASIC2.78□□□□□ -1.96
PRPF3O43395 AC068205.3-201ENST00000636385 468 ntBASIC2.78□□□□□ -1.96
PRPF3O43395 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.78□□□□□ -1.96
PRPF3O43395 ZNF72P-201ENST00000425869 1908 ntBASIC2.78□□□□□ -1.97
PRPF3O43395 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
PRPF3O43395 MIR1283-1-201ENST00000408494 87 ntBASIC2.77□□□□□ -1.97
PRPF3O43395 Y_RNA.595-201ENST00000410403 105 ntBASIC2.77□□□□□ -1.97
PRPF3O43395 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.77□□□□□ -1.97
PRPF3O43395 AL160004.2-201ENST00000432935 350 ntBASIC2.77□□□□□ -1.97
PRPF3O43395 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.77□□□□□ -1.97
PRPF3O43395 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.77□□□□□ -1.97
PRPF3O43395 AC022868.1-201ENST00000517767 391 ntBASIC2.77□□□□□ -1.97
PRPF3O43395 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.77□□□□□ -1.97
PRPF3O43395 AC093023.1-201ENST00000547375 507 ntBASIC2.77□□□□□ -1.97
PRPF3O43395 AL442163.3-201ENST00000554110 156 ntBASIC2.77□□□□□ -1.97
PRPF3O43395 AC103810.6-201ENST00000606708 136 ntBASIC2.77□□□□□ -1.97
PRPF3O43395 SNORD58B-201ENST00000607313 66 ntBASIC2.77□□□□□ -1.97
PRPF3O43395 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.77□□□□□ -1.97
PRPF3O43395 Y_RNA.812-201ENST00000610788 101 ntBASIC2.77□□□□□ -1.97
PRPF3O43395 Y_RNA.784-201ENST00000613803 101 ntBASIC2.77□□□□□ -1.97
PRPF3O43395 Y_RNA.787-201ENST00000616522 101 ntBASIC2.77□□□□□ -1.97
PRPF3O43395 Y_RNA.780-201ENST00000617336 101 ntBASIC2.77□□□□□ -1.97
PRPF3O43395 Y_RNA.801-201ENST00000619005 101 ntBASIC2.77□□□□□ -1.97
PRPF3O43395 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.77□□□□□ -1.97
PRPF3O43395 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.77□□□□□ -1.97
PRPF3O43395 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.77□□□□□ -1.97
PRPF3O43395 ZNF271P-202ENST00000465539 1970 ntBASIC2.76□□□□□ -1.97
PRPF3O43395 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.76□□□□□ -1.97
PRPF3O43395 Y_RNA.80-201ENST00000362996 102 ntBASIC2.76□□□□□ -1.97
PRPF3O43395 Y_RNA.485-201ENST00000384395 102 ntBASIC2.76□□□□□ -1.97
PRPF3O43395 RNY3P4-201ENST00000384428 101 ntBASIC2.76□□□□□ -1.97
PRPF3O43395 AL590004.1-201ENST00000405321 300 ntBASIC2.76□□□□□ -1.97
PRPF3O43395 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.76□□□□□ -1.97
PRPF3O43395 AL513328.1-201ENST00000446460 224 ntBASIC2.76□□□□□ -1.97
PRPF3O43395 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.76□□□□□ -1.97
PRPF3O43395 SNORA4.4-201ENST00000515921 135 ntBASIC2.76□□□□□ -1.97
PRPF3O43395 MIR449C-201ENST00000516047 92 ntBASIC2.76□□□□□ -1.97
PRPF3O43395 SNORA31.15-201ENST00000516771 132 ntBASIC2.76□□□□□ -1.97
PRPF3O43395 DEFB131C-201ENST00000528817 165 ntBASIC2.76□□□□□ -1.97
PRPF3O43395 AC087441.2-201ENST00000529141 262 ntBASIC2.76□□□□□ -1.97
PRPF3O43395 HSBP1P1-201ENST00000555205 166 ntBASIC2.76□□□□□ -1.97
PRPF3O43395 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
PRPF3O43395 AC040896.1-201ENST00000613819 479 ntBASIC2.76□□□□□ -1.97
PRPF3O43395 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
PRPF3O43395 AC005592.1-201ENST00000566527 1640 ntBASIC2.75□□□□□ -1.97
PRPF3O43395 Z82195.2-201ENST00000612348 18351 ntBASIC2.75□□□□□ -1.97
PRPF3O43395 RNU6-879P-201ENST00000364328 108 ntBASIC2.75□□□□□ -1.97
PRPF3O43395 SNORA33.2-201ENST00000365413 134 ntBASIC2.75□□□□□ -1.97
PRPF3O43395 SNORD14D-201ENST00000384390 87 ntBASIC2.75□□□□□ -1.97
PRPF3O43395 RNU6-160P-201ENST00000384591 107 ntBASIC2.75□□□□□ -1.97
PRPF3O43395 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
PRPF3O43395 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.75□□□□□ -1.97
PRPF3O43395 RNU1-131P-201ENST00000458943 161 ntBASIC2.75□□□□□ -1.97
PRPF3O43395 AC093852.1-201ENST00000503587 266 ntBASIC2.75□□□□□ -1.97
PRPF3O43395 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.75□□□□□ -1.97
PRPF3O43395 RRN3P3-201ENST00000549207 578 ntBASIC2.75□□□□□ -1.97
PRPF3O43395 MIR5188-201ENST00000583467 113 ntBASIC2.75□□□□□ -1.97
PRPF3O43395 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.75□□□□□ -1.97
PRPF3O43395 AC046143.2-201ENST00000609789 160 ntBASIC2.75□□□□□ -1.97
PRPF3O43395 AC099654.10-201ENST00000640395 161 ntBASIC2.75□□□□□ -1.97
PRPF3O43395 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.75□□□□□ -1.97
PRPF3O43395 MTND4P1-201ENST00000457501 1466 ntBASIC2.74□□□□□ -1.97
PRPF3O43395 U3.8-201ENST00000363675 217 ntBASIC2.74□□□□□ -1.97
PRPF3O43395 RNU6-1145P-201ENST00000384246 107 ntBASIC2.74□□□□□ -1.97
PRPF3O43395 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PRPF3O43395 MRPL42P3-201ENST00000401492 326 ntBASIC2.74□□□□□ -1.97
PRPF3O43395 RNA5SP270-201ENST00000411361 118 ntBASIC2.74□□□□□ -1.97
PRPF3O43395 AL357134.1-201ENST00000445848 426 ntBASIC2.74□□□□□ -1.97
PRPF3O43395 IFNA11P-201ENST00000446352 526 ntBASIC2.74□□□□□ -1.97
PRPF3O43395 RN7SL636P-201ENST00000497504 294 ntBASIC2.74□□□□□ -1.97
PRPF3O43395 AC234781.5-201ENST00000508429 271 ntBASIC2.74□□□□□ -1.97
PRPF3O43395 RNU6-948P-201ENST00000516374 107 ntBASIC2.74□□□□□ -1.97
PRPF3O43395 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.74□□□□□ -1.97
PRPF3O43395 AC021269.2-201ENST00000532318 330 ntBASIC2.74□□□□□ -1.97
PRPF3O43395 AP002770.2-201ENST00000543613 532 ntBASIC2.74□□□□□ -1.97
PRPF3O43395 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.74□□□□□ -1.97
PRPF3O43395 AL049779.4-201ENST00000604500 156 ntBASIC2.74□□□□□ -1.97
PRPF3O43395 AL078596.1-201ENST00000624856 447 ntBASIC2.74□□□□□ -1.97
PRPF3O43395 AC091812.1-201ENST00000432235 1948 ntBASIC2.74□□□□□ -1.97
PRPF3O43395 MTND5P35-201ENST00000557537 1720 ntBASIC2.73□□□□□ -1.97
PRPF3O43395 RNU4-82P-201ENST00000362443 140 ntBASIC2.73□□□□□ -1.97
PRPF3O43395 Y_RNA.27-201ENST00000362540 103 ntBASIC2.73□□□□□ -1.97
PRPF3O43395 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.73□□□□□ -1.97
PRPF3O43395 AC112492.4-201ENST00000456549 352 ntBASIC2.73□□□□□ -1.97
PRPF3O43395 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.73□□□□□ -1.97
PRPF3O43395 AC067942.3-201ENST00000512025 362 ntBASIC2.73□□□□□ -1.97
PRPF3O43395 RNA5SP402-201ENST00000517148 110 ntBASIC2.73□□□□□ -1.97
PRPF3O43395 MIR4446-201ENST00000578505 67 ntBASIC2.73□□□□□ -1.97
PRPF3O43395 MIR3684-201ENST00000579779 74 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms