Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.96□□□□□ -2.26
CLDN6P56747 RNU6-498P-201ENST00000459468 107 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 AC114982.1-201ENST00000469402 321 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.96□□□□□ -2.26
CLDN6P56747 RNU6-948P-201ENST00000516374 107 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 RNU6-612P-201ENST00000516909 102 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 RNA5SP404-201ENST00000517118 132 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.96□□□□□ -2.26
CLDN6P56747 AC060788.1-201ENST00000521318 469 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 RNU6-323P-201ENST00000521915 107 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 AP001372.4-201ENST00000524889 472 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 AC026470.2-201ENST00000561492 181 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 MIR5006-201ENST00000583027 110 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.96□□□□□ -2.26
CLDN6P56747 AL391646.1-201ENST00000603860 190 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 AC025449.1-201ENST00000603896 529 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 AL020996.3-201ENST00000606617 222 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 AC104458.1-201ENST00000608243 463 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.95□□□□□ -2.26
CLDN6P56747 Y_RNA.295-201ENST00000364918 102 ntBASIC0.95□□□□□ -2.26
CLDN6P56747 SNORA70.7-201ENST00000384159 133 ntBASIC0.95□□□□□ -2.26
CLDN6P56747 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
CLDN6P56747 AL356776.1-201ENST00000406574 447 ntBASIC0.95□□□□□ -2.26
CLDN6P56747 HMGN2P34-201ENST00000437647 269 ntBASIC0.95□□□□□ -2.26
CLDN6P56747 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.95□□□□□ -2.26
CLDN6P56747 RNU7-138P-201ENST00000459479 64 ntBASIC0.95□□□□□ -2.26
CLDN6P56747 HMGN1P12-201ENST00000499125 195 ntBASIC0.95□□□□□ -2.26
CLDN6P56747 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.95□□□□□ -2.26
CLDN6P56747 CENPUP1-201ENST00000526649 1202 ntBASIC0.95□□□□□ -2.26
CLDN6P56747 AC016256.1-201ENST00000547971 354 ntBASIC0.95□□□□□ -2.26
CLDN6P56747 MIR3664-201ENST00000579074 99 ntBASIC0.95□□□□□ -2.26
CLDN6P56747 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.95□□□□□ -2.26
CLDN6P56747 AC004492.1-201ENST00000607036 742 ntBASIC0.95□□□□□ -2.26
CLDN6P56747 AL360219.1-201ENST00000610230 366 ntBASIC0.95□□□□□ -2.26
CLDN6P56747 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.95□□□□□ -2.26
CLDN6P56747 AL390237.1-201ENST00000404226 1415 ntBASIC0.95□□□□□ -2.26
CLDN6P56747 RNU6-975P-201ENST00000384296 105 ntBASIC0.94□□□□□ -2.26
CLDN6P56747 RNU6-517P-201ENST00000384362 110 ntBASIC0.94□□□□□ -2.26
CLDN6P56747 MIR515-2-201ENST00000384883 83 ntBASIC0.94□□□□□ -2.26
CLDN6P56747 MIR515-1-201ENST00000384884 83 ntBASIC0.94□□□□□ -2.26
CLDN6P56747 MIR549A-201ENST00000385268 96 ntBASIC0.94□□□□□ -2.26
CLDN6P56747 MTND2P18-201ENST00000419962 1030 ntBASIC0.94□□□□□ -2.26
CLDN6P56747 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.94□□□□□ -2.26
CLDN6P56747 AC013410.2-201ENST00000422627 201 ntBASIC0.94□□□□□ -2.26
CLDN6P56747 AL365203.2-201ENST00000423444 196 ntBASIC0.94□□□□□ -2.26
CLDN6P56747 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.94□□□□□ -2.26
CLDN6P56747 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.94□□□□□ -2.26
CLDN6P56747 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.94□□□□□ -2.26
CLDN6P56747 RNU6-1146P-201ENST00000516282 102 ntBASIC0.94□□□□□ -2.26
CLDN6P56747 AC087854.1-201ENST00000519706 414 ntBASIC0.94□□□□□ -2.26
CLDN6P56747 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.94□□□□□ -2.26
CLDN6P56747 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.94□□□□□ -2.26
CLDN6P56747 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.94□□□□□ -2.26
CLDN6P56747 HIF1AP1-201ENST00000553642 175 ntBASIC0.94□□□□□ -2.26
CLDN6P56747 Z99497.2-201ENST00000603634 310 ntBASIC0.94□□□□□ -2.26
CLDN6P56747 BX284668.6-201ENST00000606899 438 ntBASIC0.94□□□□□ -2.26
CLDN6P56747 AC024933.1-201ENST00000608472 348 ntBASIC0.94□□□□□ -2.26
CLDN6P56747 TCL6_2.1-201ENST00000615162 119 ntBASIC0.94□□□□□ -2.26
CLDN6P56747 AC006001.4-201ENST00000622243 395 ntBASIC0.94□□□□□ -2.26
CLDN6P56747 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.94□□□□□ -2.26
CLDN6P56747 RNU6-1123P-201ENST00000362347 106 ntBASIC0.93□□□□□ -2.26
CLDN6P56747 RNU6-227P-201ENST00000362865 103 ntBASIC0.93□□□□□ -2.26
CLDN6P56747 SNORA29-201ENST00000384183 140 ntBASIC0.93□□□□□ -2.26
CLDN6P56747 RNU5A-2P-201ENST00000384337 116 ntBASIC0.93□□□□□ -2.26
CLDN6P56747 RNU6-417P-201ENST00000384712 107 ntBASIC0.93□□□□□ -2.26
CLDN6P56747 SNORA26.8-201ENST00000391306 124 ntBASIC0.93□□□□□ -2.26
CLDN6P56747 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.93□□□□□ -2.26
CLDN6P56747 NFU1P2-201ENST00000448700 469 ntBASIC0.93□□□□□ -2.26
CLDN6P56747 RPS27P1-201ENST00000450552 247 ntBASIC0.93□□□□□ -2.26
CLDN6P56747 AL356010.1-201ENST00000456364 102 ntBASIC0.93□□□□□ -2.26
CLDN6P56747 RNU6-1037P-201ENST00000459571 107 ntBASIC0.93□□□□□ -2.26
CLDN6P56747 RNU6-415P-201ENST00000516252 97 ntBASIC0.93□□□□□ -2.26
CLDN6P56747 MIR4714-201ENST00000580728 77 ntBASIC0.93□□□□□ -2.26
CLDN6P56747 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.93□□□□□ -2.26
CLDN6P56747 AC009509.4-201ENST00000619202 509 ntBASIC0.93□□□□□ -2.26
CLDN6P56747 AC068647.2-201ENST00000637380 353 ntBASIC0.93□□□□□ -2.26
CLDN6P56747 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
CLDN6P56747 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
CLDN6P56747 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
CLDN6P56747 RNU6-1120P-201ENST00000362988 108 ntBASIC0.92□□□□□ -2.26
CLDN6P56747 RNU6-968P-201ENST00000384076 107 ntBASIC0.92□□□□□ -2.26
CLDN6P56747 SNORA25-201ENST00000384384 134 ntBASIC0.92□□□□□ -2.26
CLDN6P56747 RNA5SP323-201ENST00000391094 133 ntBASIC0.92□□□□□ -2.26
CLDN6P56747 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.92□□□□□ -2.26
CLDN6P56747 MIR1253-201ENST00000408273 105 ntBASIC0.92□□□□□ -2.26
CLDN6P56747 RNA5SP494-201ENST00000410653 129 ntBASIC0.92□□□□□ -2.26
CLDN6P56747 MRPL35P3-201ENST00000421557 364 ntBASIC0.92□□□□□ -2.26
CLDN6P56747 MTCYBP8-201ENST00000422855 651 ntBASIC0.92□□□□□ -2.26
CLDN6P56747 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.92□□□□□ -2.26
CLDN6P56747 MTND4P32-201ENST00000437189 1237 ntBASIC0.92□□□□□ -2.26
CLDN6P56747 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.92□□□□□ -2.26
CLDN6P56747 HSPE1P13-201ENST00000451143 297 ntBASIC0.92□□□□□ -2.26
CLDN6P56747 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.92□□□□□ -2.26
CLDN6P56747 AC092989.1-201ENST00000481235 277 ntBASIC0.92□□□□□ -2.26
CLDN6P56747 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.92□□□□□ -2.26
CLDN6P56747 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.92□□□□□ -2.26
CLDN6P56747 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.92□□□□□ -2.26
CLDN6P56747 MIR4742-201ENST00000581069 85 ntBASIC0.92□□□□□ -2.26
CLDN6P56747 AC068790.2-201ENST00000602601 557 ntBASIC0.92□□□□□ -2.26
CLDN6P56747 AL929325.1-201ENST00000603096 117 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms