Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 AL136221.1-201ENST00000621449 509 ntBASIC1.57□□□□□ -2.16
MMP1P03956 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MMP1P03956 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
MMP1P03956 Y_RNA.212-201ENST00000364177 102 ntBASIC1.56□□□□□ -2.16
MMP1P03956 RNU6-214P-201ENST00000384130 107 ntBASIC1.56□□□□□ -2.16
MMP1P03956 RPL21P1-201ENST00000399532 476 ntBASIC1.56□□□□□ -2.16
MMP1P03956 ZNF885P-201ENST00000420174 1098 ntBASIC1.56□□□□□ -2.16
MMP1P03956 AL590135.1-201ENST00000422215 156 ntBASIC1.56□□□□□ -2.16
MMP1P03956 AC019205.3-201ENST00000424573 156 ntBASIC1.56□□□□□ -2.16
MMP1P03956 AC078809.1-201ENST00000427601 140 ntBASIC1.56□□□□□ -2.16
MMP1P03956 MTND3P9-201ENST00000429526 346 ntBASIC1.56□□□□□ -2.16
MMP1P03956 AC016700.2-201ENST00000446011 156 ntBASIC1.56□□□□□ -2.16
MMP1P03956 RPS29P29-201ENST00000456396 171 ntBASIC1.56□□□□□ -2.16
MMP1P03956 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.56□□□□□ -2.16
MMP1P03956 AC015911.1-201ENST00000495111 156 ntBASIC1.56□□□□□ -2.16
MMP1P03956 AC145146.1-201ENST00000496370 254 ntBASIC1.56□□□□□ -2.16
MMP1P03956 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.56□□□□□ -2.16
MMP1P03956 RNU6-1088P-201ENST00000516850 104 ntBASIC1.56□□□□□ -2.16
MMP1P03956 AC026371.1-201ENST00000551867 419 ntBASIC1.56□□□□□ -2.16
MMP1P03956 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.56□□□□□ -2.16
MMP1P03956 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.56□□□□□ -2.16
MMP1P03956 AC103810.8-201ENST00000607347 118 ntBASIC1.56□□□□□ -2.16
MMP1P03956 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
MMP1P03956 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
MMP1P03956 RNU6-227P-201ENST00000362865 103 ntBASIC1.55□□□□□ -2.16
MMP1P03956 Y_RNA.86-201ENST00000363020 111 ntBASIC1.55□□□□□ -2.16
MMP1P03956 Y_RNA.248-201ENST00000364501 109 ntBASIC1.55□□□□□ -2.16
MMP1P03956 RNU6-128P-201ENST00000383976 107 ntBASIC1.55□□□□□ -2.16
MMP1P03956 RNU6-160P-201ENST00000384591 107 ntBASIC1.55□□□□□ -2.16
MMP1P03956 SNORA48.1-201ENST00000390879 135 ntBASIC1.55□□□□□ -2.16
MMP1P03956 SNORA12-201ENST00000391162 147 ntBASIC1.55□□□□□ -2.16
MMP1P03956 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.55□□□□□ -2.16
MMP1P03956 AL357139.1-201ENST00000407792 426 ntBASIC1.55□□□□□ -2.16
MMP1P03956 RNA5SP201-201ENST00000410316 124 ntBASIC1.55□□□□□ -2.16
MMP1P03956 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.55□□□□□ -2.16
MMP1P03956 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.55□□□□□ -2.16
MMP1P03956 AL035666.1-201ENST00000446195 348 ntBASIC1.55□□□□□ -2.16
MMP1P03956 RNA5SP57-201ENST00000459463 123 ntBASIC1.55□□□□□ -2.16
MMP1P03956 TRBVA-201ENST00000498804 316 ntBASIC1.55□□□□□ -2.16
MMP1P03956 AC005741.1-201ENST00000511094 432 ntBASIC1.55□□□□□ -2.16
MMP1P03956 RNU6-864P-201ENST00000516256 108 ntBASIC1.55□□□□□ -2.16
MMP1P03956 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.55□□□□□ -2.16
MMP1P03956 HSBP1P1-201ENST00000555205 166 ntBASIC1.55□□□□□ -2.16
MMP1P03956 SNORA59B-202ENST00000578183 701 ntBASIC1.55□□□□□ -2.16
MMP1P03956 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.55□□□□□ -2.16
MMP1P03956 AL133215.3-201ENST00000609801 448 ntBASIC1.55□□□□□ -2.16
MMP1P03956 MIR6078-201ENST00000611069 100 ntBASIC1.55□□□□□ -2.16
MMP1P03956 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.55□□□□□ -2.16
MMP1P03956 CBX3P1-201ENST00000325243 554 ntBASIC1.54□□□□□ -2.16
MMP1P03956 RNU6-23P-201ENST00000363283 107 ntBASIC1.54□□□□□ -2.16
MMP1P03956 Y_RNA.151-201ENST00000363566 112 ntBASIC1.54□□□□□ -2.16
MMP1P03956 Y_RNA.301-201ENST00000364990 103 ntBASIC1.54□□□□□ -2.16
MMP1P03956 Y_RNA.504-201ENST00000384481 104 ntBASIC1.54□□□□□ -2.16
MMP1P03956 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.54□□□□□ -2.16
MMP1P03956 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.54□□□□□ -2.16
MMP1P03956 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.54□□□□□ -2.16
MMP1P03956 HSPE1P21-201ENST00000438283 308 ntBASIC1.54□□□□□ -2.16
MMP1P03956 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.54□□□□□ -2.16
MMP1P03956 MTCO1P29-201ENST00000496868 288 ntBASIC1.54□□□□□ -2.16
MMP1P03956 MTCO2P30-201ENST00000503662 364 ntBASIC1.54□□□□□ -2.16
MMP1P03956 AC096745.1-201ENST00000509945 370 ntBASIC1.54□□□□□ -2.16
MMP1P03956 RNU6-358P-201ENST00000516564 75 ntBASIC1.54□□□□□ -2.16
MMP1P03956 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.54□□□□□ -2.16
MMP1P03956 AF235103.2-201ENST00000525753 346 ntBASIC1.54□□□□□ -2.16
MMP1P03956 AC068338.1-201ENST00000565567 176 ntBASIC1.54□□□□□ -2.16
MMP1P03956 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.54□□□□□ -2.16
MMP1P03956 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.54□□□□□ -2.16
MMP1P03956 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.54□□□□□ -2.16
MMP1P03956 AC018638.8-201ENST00000588755 281 ntBASIC1.54□□□□□ -2.16
MMP1P03956 AC060780.3-201ENST00000589464 80 ntBASIC1.54□□□□□ -2.16
MMP1P03956 RMST_2.1-201ENST00000617263 136 ntBASIC1.54□□□□□ -2.16
MMP1P03956 AC091895.1-201ENST00000624494 256 ntBASIC1.54□□□□□ -2.16
MMP1P03956 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.54□□□□□ -2.16
MMP1P03956 AC092268.1-201ENST00000342691 405 ntBASIC1.53□□□□□ -2.16
MMP1P03956 RNA5SP493-201ENST00000364115 91 ntBASIC1.53□□□□□ -2.16
MMP1P03956 SNORD116-11-201ENST00000383882 92 ntBASIC1.53□□□□□ -2.16
MMP1P03956 RNU6-203P-201ENST00000384038 104 ntBASIC1.53□□□□□ -2.16
MMP1P03956 Y_RNA.540-201ENST00000384638 111 ntBASIC1.53□□□□□ -2.16
MMP1P03956 MIR758-201ENST00000390227 88 ntBASIC1.53□□□□□ -2.16
MMP1P03956 MTCYBP2-201ENST00000407745 171 ntBASIC1.53□□□□□ -2.16
MMP1P03956 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.53□□□□□ -2.16
MMP1P03956 AC009541.1-201ENST00000438279 2662 ntBASIC1.53□□□□□ -2.16
MMP1P03956 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.53□□□□□ -2.16
MMP1P03956 AC016632.1-201ENST00000503994 196 ntBASIC1.53□□□□□ -2.16
MMP1P03956 AC021146.2-201ENST00000504736 556 ntBASIC1.53□□□□□ -2.16
MMP1P03956 MIR449C-201ENST00000516047 92 ntBASIC1.53□□□□□ -2.16
MMP1P03956 RNU4-49P-201ENST00000516080 140 ntBASIC1.53□□□□□ -2.16
MMP1P03956 MRPS36P4-201ENST00000534436 298 ntBASIC1.53□□□□□ -2.16
MMP1P03956 MIR3169-201ENST00000578032 83 ntBASIC1.53□□□□□ -2.16
MMP1P03956 AC136443.5-201ENST00000603741 370 ntBASIC1.53□□□□□ -2.16
MMP1P03956 Z98751.3-201ENST00000604447 521 ntBASIC1.53□□□□□ -2.16
MMP1P03956 AC010900.2-201ENST00000604508 210 ntBASIC1.53□□□□□ -2.16
MMP1P03956 MIR3976-201ENST00000606807 139 ntBASIC1.53□□□□□ -2.16
MMP1P03956 MIR7974-201ENST00000615835 79 ntBASIC1.53□□□□□ -2.16
MMP1P03956 U6atac.1-201ENST00000616025 117 ntBASIC1.53□□□□□ -2.16
MMP1P03956 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.53□□□□□ -2.16
MMP1P03956 AC130454.1-201ENST00000622948 401 ntBASIC1.53□□□□□ -2.16
MMP1P03956 AC009033.1-201ENST00000624279 431 ntBASIC1.53□□□□□ -2.16
MMP1P03956 RNU6-562P-201ENST00000362731 107 ntBASIC1.52□□□□□ -2.17
MMP1P03956 RNU5B-2P-201ENST00000363036 113 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms