Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 RNU6-910P-201ENST00000390844 107 ntBASIC0.53□□□□□ -2.32
VCX3BQ9H321 RNA5SP323-201ENST00000391094 133 ntBASIC0.53□□□□□ -2.32
VCX3BQ9H321 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.53□□□□□ -2.32
VCX3BQ9H321 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.53□□□□□ -2.32
VCX3BQ9H321 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.53□□□□□ -2.32
VCX3BQ9H321 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.53□□□□□ -2.32
VCX3BQ9H321 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.53□□□□□ -2.32
VCX3BQ9H321 AC022364.2-201ENST00000457963 554 ntBASIC0.53□□□□□ -2.32
VCX3BQ9H321 SNORA59A-201ENST00000459326 152 ntBASIC0.53□□□□□ -2.32
VCX3BQ9H321 AC048334.1-201ENST00000477975 159 ntBASIC0.53□□□□□ -2.32
VCX3BQ9H321 COX6CP6-201ENST00000490840 228 ntBASIC0.53□□□□□ -2.32
VCX3BQ9H321 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.53□□□□□ -2.32
VCX3BQ9H321 AC105417.1-201ENST00000514691 285 ntBASIC0.53□□□□□ -2.32
VCX3BQ9H321 AC106038.2-201ENST00000520706 568 ntBASIC0.53□□□□□ -2.32
VCX3BQ9H321 AP003484.1-201ENST00000530974 250 ntBASIC0.53□□□□□ -2.32
VCX3BQ9H321 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.53□□□□□ -2.32
VCX3BQ9H321 AC025423.5-201ENST00000550230 219 ntBASIC0.53□□□□□ -2.32
VCX3BQ9H321 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.53□□□□□ -2.32
VCX3BQ9H321 AL391840.1-201ENST00000571144 367 ntBASIC0.53□□□□□ -2.32
VCX3BQ9H321 MIR3945-201ENST00000581853 98 ntBASIC0.53□□□□□ -2.32
VCX3BQ9H321 AC068790.2-201ENST00000602601 557 ntBASIC0.53□□□□□ -2.32
VCX3BQ9H321 AC245014.2-201ENST00000603689 287 ntBASIC0.53□□□□□ -2.32
VCX3BQ9H321 AC022217.4-201ENST00000604389 163 ntBASIC0.53□□□□□ -2.32
VCX3BQ9H321 AC246785.4-201ENST00000605374 287 ntBASIC0.53□□□□□ -2.32
VCX3BQ9H321 AC009229.3-201ENST00000608056 282 ntBASIC0.53□□□□□ -2.32
VCX3BQ9H321 AC104465.1-201ENST00000611365 139 ntBASIC0.53□□□□□ -2.32
VCX3BQ9H321 U6.108-201ENST00000637764 58 ntBASIC0.53□□□□□ -2.32
VCX3BQ9H321 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
VCX3BQ9H321 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
VCX3BQ9H321 RNU5B-2P-201ENST00000363036 113 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 RNU6-282P-201ENST00000365357 103 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 Y_RNA.363-201ENST00000365529 113 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 RNU6-606P-201ENST00000384721 111 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 MIR586-201ENST00000385035 97 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 SNORD73A-201ENST00000386062 65 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 SNORA40.3-201ENST00000390964 122 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 SNORD12-201ENST00000391002 90 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 SNORA17.3-201ENST00000391159 129 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 SNORA11.2-201ENST00000408318 127 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.52□□□□□ -2.33
VCX3BQ9H321 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.52□□□□□ -2.33
VCX3BQ9H321 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.52□□□□□ -2.33
VCX3BQ9H321 AC074290.1-201ENST00000448883 135 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 SRRM1P2-201ENST00000464531 1192 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 COX6CP14-201ENST00000469580 174 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.52□□□□□ -2.33
VCX3BQ9H321 RNU6-1129P-201ENST00000515964 104 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 RNU6-922P-201ENST00000516753 99 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 RNU6-612P-201ENST00000516909 102 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.52□□□□□ -2.33
VCX3BQ9H321 RNU6-323P-201ENST00000521915 107 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.52□□□□□ -2.33
VCX3BQ9H321 AC090616.2-202ENST00000584248 222 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 BNIP3P39-201ENST00000601077 554 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 AC146944.4-201ENST00000602697 718 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 BNIP3P10-201ENST00000605360 577 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 U2.17-201ENST00000611454 95 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.52□□□□□ -2.33
VCX3BQ9H321 AL133216.2-202ENST00000634512 349 ntBASIC0.52□□□□□ -2.33
VCX3BQ9H321 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
VCX3BQ9H321 MIR378A-201ENST00000362177 66 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 RNU6-227P-201ENST00000362865 103 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 RNU6-456P-201ENST00000384493 107 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 RNU6-110P-201ENST00000384508 104 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 MIR605-201ENST00000385078 83 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 MIR1253-201ENST00000408273 105 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 RNU2-29P-201ENST00000410423 189 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 RNU6-57P-201ENST00000411348 103 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 AC133104.1-201ENST00000429100 218 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.51□□□□□ -2.33
VCX3BQ9H321 CETN4P-201ENST00000432407 469 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 AC005002.2-201ENST00000438228 269 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 AL033528.1-201ENST00000453780 140 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 RPS29P27-201ENST00000463711 170 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 AC105758.1-201ENST00000506038 399 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.51□□□□□ -2.33
VCX3BQ9H321 RN7SKP219-201ENST00000516825 296 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.51□□□□□ -2.33
VCX3BQ9H321 AP002963.1-201ENST00000530590 184 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 AL137161.1-201ENST00000532231 390 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 AC245884.10-201ENST00000597355 337 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 AC011458.1-201ENST00000604034 617 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 AL353997.5-201ENST00000618886 171 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 AL513423.1-201ENST00000621695 132 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 AC139792.3-201ENST00000623525 224 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 AC008873.1-201ENST00000625051 138 ntBASIC0.51□□□□□ -2.33
VCX3BQ9H321 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
VCX3BQ9H321 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 RNA5SP361-201ENST00000362686 118 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 Y_RNA.124-201ENST00000363339 93 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 RNU6-297P-201ENST00000384636 107 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 Y_RNA.560-201ENST00000384689 102 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 SNORD41-201ENST00000386967 70 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
VCX3BQ9H321 RNU6-1054P-201ENST00000411293 104 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.5□□□□□ -2.33
VCX3BQ9H321 AC108667.1-201ENST00000428618 249 ntBASIC0.5□□□□□ -2.33
VCX3BQ9H321 AL121890.1-201ENST00000435457 205 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms