Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SNORD115-32-201ENST00000364079 82 ntBASIC2.08□□□□□ -2.08
PDX1P52945 Y_RNA.259-201ENST00000364619 101 ntBASIC2.08□□□□□ -2.08
PDX1P52945 SNORA18.2-201ENST00000383865 132 ntBASIC2.08□□□□□ -2.08
PDX1P52945 RNU1-52P-201ENST00000384190 164 ntBASIC2.08□□□□□ -2.08
PDX1P52945 MIR1294-201ENST00000408503 142 ntBASIC2.08□□□□□ -2.08
PDX1P52945 RNU2-2P-201ENST00000410396 191 ntBASIC2.08□□□□□ -2.08
PDX1P52945 AC004866.1-201ENST00000411748 78 ntBASIC2.08□□□□□ -2.08
PDX1P52945 snoU13.30-201ENST00000458951 104 ntBASIC2.08□□□□□ -2.08
PDX1P52945 ATP5EP1-201ENST00000510257 156 ntBASIC2.08□□□□□ -2.08
PDX1P52945 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.08□□□□□ -2.08
PDX1P52945 Y_RNA.718-201ENST00000517110 102 ntBASIC2.08□□□□□ -2.08
PDX1P52945 AL590705.4-201ENST00000532209 134 ntBASIC2.08□□□□□ -2.08
PDX1P52945 AC027288.2-201ENST00000553028 243 ntBASIC2.08□□□□□ -2.08
PDX1P52945 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.08□□□□□ -2.08
PDX1P52945 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.08□□□□□ -2.08
PDX1P52945 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.08□□□□□ -2.08
PDX1P52945 U2.15-201ENST00000611544 191 ntBASIC2.08□□□□□ -2.08
PDX1P52945 U2.16-201ENST00000613119 191 ntBASIC2.08□□□□□ -2.08
PDX1P52945 U2.12-201ENST00000613778 191 ntBASIC2.08□□□□□ -2.08
PDX1P52945 U2.20-201ENST00000613956 192 ntBASIC2.08□□□□□ -2.08
PDX1P52945 U2.9-201ENST00000615427 191 ntBASIC2.08□□□□□ -2.08
PDX1P52945 U2.11-201ENST00000616345 191 ntBASIC2.08□□□□□ -2.08
PDX1P52945 U2.2-201ENST00000616535 191 ntBASIC2.08□□□□□ -2.08
PDX1P52945 U2.3-201ENST00000617785 191 ntBASIC2.08□□□□□ -2.08
PDX1P52945 U2.19-201ENST00000618602 191 ntBASIC2.08□□□□□ -2.08
PDX1P52945 RNU2-1-201ENST00000618664 191 ntBASIC2.08□□□□□ -2.08
PDX1P52945 U2.6-201ENST00000619225 191 ntBASIC2.08□□□□□ -2.08
PDX1P52945 U2.5-201ENST00000619465 191 ntBASIC2.08□□□□□ -2.08
PDX1P52945 U2.10-201ENST00000620268 191 ntBASIC2.08□□□□□ -2.08
PDX1P52945 AC009831.4-201ENST00000620744 325 ntBASIC2.08□□□□□ -2.08
PDX1P52945 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.08□□□□□ -2.08
PDX1P52945 Z82209.1-201ENST00000422141 2135 ntBASIC2.08□□□□□ -2.08
PDX1P52945 ZNF72P-201ENST00000425869 1908 ntBASIC2.07□□□□□ -2.08
PDX1P52945 ZNF720P1-201ENST00000562403 1939 ntBASIC2.07□□□□□ -2.08
PDX1P52945 AP006437.1-201ENST00000641440 3685 ntBASIC2.07□□□□□ -2.08
PDX1P52945 MIRLET7G-201ENST00000362280 84 ntBASIC2.07□□□□□ -2.08
PDX1P52945 RNU6-874P-201ENST00000362390 105 ntBASIC2.07□□□□□ -2.08
PDX1P52945 SNORA3A-201ENST00000364113 130 ntBASIC2.07□□□□□ -2.08
PDX1P52945 Y_RNA.384-201ENST00000383909 102 ntBASIC2.07□□□□□ -2.08
PDX1P52945 Y_RNA.405-201ENST00000383979 100 ntBASIC2.07□□□□□ -2.08
PDX1P52945 Y_RNA.451-201ENST00000384200 100 ntBASIC2.07□□□□□ -2.08
PDX1P52945 Y_RNA.524-201ENST00000384564 100 ntBASIC2.07□□□□□ -2.08
PDX1P52945 Y_RNA.561-201ENST00000384694 100 ntBASIC2.07□□□□□ -2.08
PDX1P52945 U8.13-201ENST00000390842 128 ntBASIC2.07□□□□□ -2.08
PDX1P52945 SNORA12.2-201ENST00000391040 156 ntBASIC2.07□□□□□ -2.08
PDX1P52945 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.07□□□□□ -2.08
PDX1P52945 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.07□□□□□ -2.08
PDX1P52945 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.07□□□□□ -2.08
PDX1P52945 RPL30P15-201ENST00000457129 321 ntBASIC2.07□□□□□ -2.08
PDX1P52945 SNORD19B-201ENST00000459623 84 ntBASIC2.07□□□□□ -2.08
PDX1P52945 AC079804.2-201ENST00000490376 200 ntBASIC2.07□□□□□ -2.08
PDX1P52945 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.07□□□□□ -2.08
PDX1P52945 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.07□□□□□ -2.08
PDX1P52945 CYCSP26-201ENST00000534107 320 ntBASIC2.07□□□□□ -2.08
PDX1P52945 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.07□□□□□ -2.08
PDX1P52945 NDUFA5P6-201ENST00000542110 379 ntBASIC2.07□□□□□ -2.08
PDX1P52945 AC121758.2-201ENST00000553271 193 ntBASIC2.07□□□□□ -2.08
PDX1P52945 MYL12BP1-201ENST00000569826 507 ntBASIC2.07□□□□□ -2.08
PDX1P52945 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.07□□□□□ -2.08
PDX1P52945 MIR6895-201ENST00000613497 78 ntBASIC2.07□□□□□ -2.08
PDX1P52945 AC084781.2-201ENST00000615568 161 ntBASIC2.07□□□□□ -2.08
PDX1P52945 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.07□□□□□ -2.08
PDX1P52945 AC005336.3-201ENST00000623833 2679 ntBASIC2.07□□□□□ -2.08
PDX1P52945 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
PDX1P52945 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PDX1P52945 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PDX1P52945 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
PDX1P52945 RNU6-222P-201ENST00000362438 107 ntBASIC2.06□□□□□ -2.08
PDX1P52945 RNY1P16-201ENST00000363063 111 ntBASIC2.06□□□□□ -2.08
PDX1P52945 RNU6-234P-201ENST00000365229 104 ntBASIC2.06□□□□□ -2.08
PDX1P52945 RNU6-26P-201ENST00000383985 107 ntBASIC2.06□□□□□ -2.08
PDX1P52945 RNU6-17P-201ENST00000384245 107 ntBASIC2.06□□□□□ -2.08
PDX1P52945 Y_RNA.509-201ENST00000384506 99 ntBASIC2.06□□□□□ -2.08
PDX1P52945 RNU6-18P-201ENST00000384527 107 ntBASIC2.06□□□□□ -2.08
PDX1P52945 SNORA75.6-201ENST00000391318 127 ntBASIC2.06□□□□□ -2.08
PDX1P52945 MTCYBP4-201ENST00000401524 249 ntBASIC2.06□□□□□ -2.08
PDX1P52945 AC027124.2-201ENST00000428249 105 ntBASIC2.06□□□□□ -2.08
PDX1P52945 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.06□□□□□ -2.08
PDX1P52945 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.06□□□□□ -2.08
PDX1P52945 Y_RNA.653-201ENST00000459091 95 ntBASIC2.06□□□□□ -2.08
PDX1P52945 AC097473.1-201ENST00000508142 408 ntBASIC2.06□□□□□ -2.08
PDX1P52945 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.06□□□□□ -2.08
PDX1P52945 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.06□□□□□ -2.08
PDX1P52945 Y_RNA.675-201ENST00000516389 149 ntBASIC2.06□□□□□ -2.08
PDX1P52945 RNU6-1098P-201ENST00000516772 96 ntBASIC2.06□□□□□ -2.08
PDX1P52945 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.06□□□□□ -2.08
PDX1P52945 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.06□□□□□ -2.08
PDX1P52945 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
PDX1P52945 AL355802.3-201ENST00000607571 545 ntBASIC2.06□□□□□ -2.08
PDX1P52945 MIR6132-201ENST00000622083 109 ntBASIC2.06□□□□□ -2.08
PDX1P52945 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
PDX1P52945 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
PDX1P52945 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PDX1P52945 RNU4-79P-201ENST00000362764 141 ntBASIC2.05□□□□□ -2.08
PDX1P52945 Y_RNA.319-201ENST00000365138 92 ntBASIC2.05□□□□□ -2.08
PDX1P52945 MT-TD-201ENST00000387419 68 ntBASIC2.05□□□□□ -2.08
PDX1P52945 MIR1262-201ENST00000408276 93 ntBASIC2.05□□□□□ -2.08
PDX1P52945 AF228730.4-201ENST00000421457 183 ntBASIC2.05□□□□□ -2.08
PDX1P52945 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.05□□□□□ -2.08
PDX1P52945 MTND3P23-201ENST00000431980 347 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms