Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.52□□□□□ -2.33
CD40LGP29965 snoU13.6-201ENST00000458785 104 ntBASIC0.52□□□□□ -2.33
CD40LGP29965 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.52□□□□□ -2.33
CD40LGP29965 RPS27P22-201ENST00000478056 241 ntBASIC0.52□□□□□ -2.33
CD40LGP29965 BET1P1-201ENST00000482276 359 ntBASIC0.52□□□□□ -2.33
CD40LGP29965 RPS26P48-201ENST00000491713 339 ntBASIC0.52□□□□□ -2.33
CD40LGP29965 AC079382.1-201ENST00000493346 557 ntBASIC0.52□□□□□ -2.33
CD40LGP29965 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.52□□□□□ -2.33
CD40LGP29965 RNA5SP121-201ENST00000516537 101 ntBASIC0.52□□□□□ -2.33
CD40LGP29965 MIR4775-201ENST00000581168 75 ntBASIC0.52□□□□□ -2.33
CD40LGP29965 Z99497.2-201ENST00000603634 310 ntBASIC0.52□□□□□ -2.33
CD40LGP29965 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.52□□□□□ -2.33
CD40LGP29965 AC002044.1-201ENST00000606707 158 ntBASIC0.52□□□□□ -2.33
CD40LGP29965 MIR6734-201ENST00000621166 68 ntBASIC0.52□□□□□ -2.33
CD40LGP29965 AL513423.1-201ENST00000621695 132 ntBASIC0.52□□□□□ -2.33
CD40LGP29965 AL603839.4-201ENST00000624658 1005 ntBASIC0.52□□□□□ -2.33
CD40LGP29965 MIR6767-201ENST00000637302 66 ntBASIC0.52□□□□□ -2.33
CD40LGP29965 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CD40LGP29965 SNORD113-6-201ENST00000363345 75 ntBASIC0.51□□□□□ -2.33
CD40LGP29965 Y_RNA.480-201ENST00000384364 102 ntBASIC0.51□□□□□ -2.33
CD40LGP29965 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.51□□□□□ -2.33
CD40LGP29965 AC004386.2-201ENST00000441858 148 ntBASIC0.51□□□□□ -2.33
CD40LGP29965 EPS15P1-201ENST00000448836 336 ntBASIC0.51□□□□□ -2.33
CD40LGP29965 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
CD40LGP29965 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.51□□□□□ -2.33
CD40LGP29965 UBE2V1P12-201ENST00000503954 474 ntBASIC0.51□□□□□ -2.33
CD40LGP29965 RNU2-69P-201ENST00000516061 100 ntBASIC0.51□□□□□ -2.33
CD40LGP29965 RNU4-54P-201ENST00000516428 129 ntBASIC0.51□□□□□ -2.33
CD40LGP29965 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.51□□□□□ -2.33
CD40LGP29965 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.51□□□□□ -2.33
CD40LGP29965 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CD40LGP29965 AC011604.1-201ENST00000545978 196 ntBASIC0.51□□□□□ -2.33
CD40LGP29965 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.51□□□□□ -2.33
CD40LGP29965 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.51□□□□□ -2.33
CD40LGP29965 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.51□□□□□ -2.33
CD40LGP29965 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.51□□□□□ -2.33
CD40LGP29965 AC022217.4-201ENST00000604389 163 ntBASIC0.51□□□□□ -2.33
CD40LGP29965 AC009229.3-201ENST00000608056 282 ntBASIC0.51□□□□□ -2.33
CD40LGP29965 AC005562.2-201ENST00000618264 111 ntBASIC0.51□□□□□ -2.33
CD40LGP29965 U6.108-201ENST00000637764 58 ntBASIC0.51□□□□□ -2.33
CD40LGP29965 AC027514.1-201ENST00000588561 1603 ntBASIC0.5□□□□□ -2.33
CD40LGP29965 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CD40LGP29965 RNU5F-7P-201ENST00000363696 115 ntBASIC0.5□□□□□ -2.33
CD40LGP29965 RNU6-42P-201ENST00000384165 107 ntBASIC0.5□□□□□ -2.33
CD40LGP29965 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
CD40LGP29965 SNORD70.1-201ENST00000391007 85 ntBASIC0.5□□□□□ -2.33
CD40LGP29965 MIR1287-201ENST00000408492 90 ntBASIC0.5□□□□□ -2.33
CD40LGP29965 AC098592.1-201ENST00000419352 333 ntBASIC0.5□□□□□ -2.33
CD40LGP29965 AL596276.1-201ENST00000434465 418 ntBASIC0.5□□□□□ -2.33
CD40LGP29965 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.5□□□□□ -2.33
CD40LGP29965 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.5□□□□□ -2.33
CD40LGP29965 AC098869.1-201ENST00000481627 292 ntBASIC0.5□□□□□ -2.33
CD40LGP29965 Vault.3-201ENST00000516676 95 ntBASIC0.5□□□□□ -2.33
CD40LGP29965 RNU6-1223P-201ENST00000517124 104 ntBASIC0.5□□□□□ -2.33
CD40LGP29965 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.5□□□□□ -2.33
CD40LGP29965 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.5□□□□□ -2.33
CD40LGP29965 AL391840.1-201ENST00000571144 367 ntBASIC0.5□□□□□ -2.33
CD40LGP29965 MIR5006-201ENST00000583027 110 ntBASIC0.5□□□□□ -2.33
CD40LGP29965 AP001596.2-201ENST00000608410 312 ntBASIC0.5□□□□□ -2.33
CD40LGP29965 MIR8054-201ENST00000620877 86 ntBASIC0.5□□□□□ -2.33
CD40LGP29965 AC023934.1-201ENST00000574529 2389 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 RNU6-500P-201ENST00000362349 107 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 RNU4-12P-201ENST00000365233 139 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 RNU6-1029P-201ENST00000384109 107 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 RNU6-74P-201ENST00000384235 107 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 RNU6-434P-201ENST00000384376 107 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 MIR653-201ENST00000385279 96 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 MIR454-201ENST00000390180 115 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 SNORA16.2-201ENST00000390991 127 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 MIR1253-201ENST00000408273 105 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 MIR548J-201ENST00000408833 112 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.49□□□□□ -2.33
CD40LGP29965 NDUFA5P4-201ENST00000436704 385 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 NFU1P2-201ENST00000448700 469 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.49□□□□□ -2.33
CD40LGP29965 HMGB1P29-201ENST00000505659 499 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 RNU6-947P-201ENST00000516264 106 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 RNU6-410P-201ENST00000517006 107 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 AC007834.2-201ENST00000536310 343 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 MIR5000-201ENST00000577717 103 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 RSL24D1P11-201ENST00000591045 491 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 AC080078.2-201ENST00000603766 501 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 AC097065.2-201ENST00000608159 533 ntBASIC0.49□□□□□ -2.33
CD40LGP29965 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
CD40LGP29965 RNA5SP347-201ENST00000362445 119 ntBASIC0.48□□□□□ -2.33
CD40LGP29965 RNU6-266P-201ENST00000364225 107 ntBASIC0.48□□□□□ -2.33
CD40LGP29965 Y_RNA.238-201ENST00000364441 102 ntBASIC0.48□□□□□ -2.33
CD40LGP29965 RNU4-76P-201ENST00000364509 141 ntBASIC0.48□□□□□ -2.33
CD40LGP29965 MIR513B-201ENST00000385136 84 ntBASIC0.48□□□□□ -2.33
CD40LGP29965 SNORA12.1-201ENST00000390873 148 ntBASIC0.48□□□□□ -2.33
CD40LGP29965 RNU4-46P-201ENST00000410818 138 ntBASIC0.48□□□□□ -2.33
CD40LGP29965 AC004866.1-201ENST00000411748 78 ntBASIC0.48□□□□□ -2.33
CD40LGP29965 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.48□□□□□ -2.33
CD40LGP29965 CETN4P-201ENST00000432407 469 ntBASIC0.48□□□□□ -2.33
CD40LGP29965 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.48□□□□□ -2.33
CD40LGP29965 AC005002.2-201ENST00000438228 269 ntBASIC0.48□□□□□ -2.33
CD40LGP29965 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.48□□□□□ -2.33
CD40LGP29965 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.48□□□□□ -2.33
CD40LGP29965 RNU7-182P-201ENST00000459009 62 ntBASIC0.48□□□□□ -2.33
CD40LGP29965 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 985.1 ms