Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC004223.1-201ENST00000479840 271 ntBASIC1.5□□□□□ -2.17
MSH4O15457 AC010409.1-201ENST00000487382 476 ntBASIC1.5□□□□□ -2.17
MSH4O15457 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.5□□□□□ -2.17
MSH4O15457 TRMT112P2-201ENST00000512910 132 ntBASIC1.5□□□□□ -2.17
MSH4O15457 SEPT14P4-201ENST00000513445 186 ntBASIC1.5□□□□□ -2.17
MSH4O15457 RNU6-314P-201ENST00000516574 104 ntBASIC1.5□□□□□ -2.17
MSH4O15457 SNORA31.17-201ENST00000516953 127 ntBASIC1.5□□□□□ -2.17
MSH4O15457 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.5□□□□□ -2.17
MSH4O15457 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.5□□□□□ -2.17
MSH4O15457 FO082796.1-201ENST00000523795 183 ntBASIC1.5□□□□□ -2.17
MSH4O15457 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.5□□□□□ -2.17
MSH4O15457 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.5□□□□□ -2.17
MSH4O15457 RNU6-89P-201ENST00000606519 100 ntBASIC1.5□□□□□ -2.17
MSH4O15457 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
MSH4O15457 OR4G1P-203ENST00000641984 1631 ntBASIC1.5□□□□□ -2.17
MSH4O15457 RNU6-522P-201ENST00000364497 107 ntBASIC1.49□□□□□ -2.17
MSH4O15457 RNU6-203P-201ENST00000384038 104 ntBASIC1.49□□□□□ -2.17
MSH4O15457 RNU6-968P-201ENST00000384076 107 ntBASIC1.49□□□□□ -2.17
MSH4O15457 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
MSH4O15457 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.49□□□□□ -2.17
MSH4O15457 MIR934-201ENST00000401241 83 ntBASIC1.49□□□□□ -2.17
MSH4O15457 MTCO3P46-201ENST00000425787 232 ntBASIC1.49□□□□□ -2.17
MSH4O15457 ERLEC1P1-201ENST00000433806 578 ntBASIC1.49□□□□□ -2.17
MSH4O15457 AC092473.1-201ENST00000441098 221 ntBASIC1.49□□□□□ -2.17
MSH4O15457 AC007395.1-201ENST00000451333 677 ntBASIC1.49□□□□□ -2.17
MSH4O15457 AC010531.2-201ENST00000465012 153 ntBASIC1.49□□□□□ -2.17
MSH4O15457 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.49□□□□□ -2.17
MSH4O15457 AC083904.1-201ENST00000487828 231 ntBASIC1.49□□□□□ -2.17
MSH4O15457 RNU6-1281P-201ENST00000516223 105 ntBASIC1.49□□□□□ -2.17
MSH4O15457 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.49□□□□□ -2.17
MSH4O15457 DEFB131C-201ENST00000528817 165 ntBASIC1.49□□□□□ -2.17
MSH4O15457 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.49□□□□□ -2.17
MSH4O15457 AC083806.3-201ENST00000614016 455 ntBASIC1.49□□□□□ -2.17
MSH4O15457 FAM157A-202ENST00000615155 405 ntBASIC1.49□□□□□ -2.17
MSH4O15457 AC068137.3-201ENST00000639191 341 ntBASIC1.49□□□□□ -2.17
MSH4O15457 AC121333.1-201ENST00000567488 2709 ntBASIC1.49□□□□□ -2.17
MSH4O15457 MTND5P9-201ENST00000503854 1755 ntBASIC1.49□□□□□ -2.17
MSH4O15457 AL159152.1-201ENST00000635019 2587 ntBASIC1.49□□□□□ -2.17
MSH4O15457 AL391987.6-201ENST00000305671 199 ntBASIC1.48□□□□□ -2.17
MSH4O15457 MIR126-201ENST00000362291 85 ntBASIC1.48□□□□□ -2.17
MSH4O15457 RNU5B-2P-201ENST00000363036 113 ntBASIC1.48□□□□□ -2.17
MSH4O15457 Y_RNA.132-201ENST00000363421 102 ntBASIC1.48□□□□□ -2.17
MSH4O15457 RNU6-1286P-201ENST00000383871 107 ntBASIC1.48□□□□□ -2.17
MSH4O15457 RNU6-483P-201ENST00000384088 108 ntBASIC1.48□□□□□ -2.17
MSH4O15457 RNU6-439P-201ENST00000384188 106 ntBASIC1.48□□□□□ -2.17
MSH4O15457 MIR521-1-201ENST00000384902 87 ntBASIC1.48□□□□□ -2.17
MSH4O15457 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.48□□□□□ -2.17
MSH4O15457 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.48□□□□□ -2.17
MSH4O15457 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.48□□□□□ -2.17
MSH4O15457 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
MSH4O15457 MTCO1P44-201ENST00000441935 243 ntBASIC1.48□□□□□ -2.17
MSH4O15457 MTND1P1-201ENST00000445453 368 ntBASIC1.48□□□□□ -2.17
MSH4O15457 RNU1-98P-201ENST00000458992 160 ntBASIC1.48□□□□□ -2.17
MSH4O15457 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.48□□□□□ -2.17
MSH4O15457 MTCO1P29-201ENST00000496868 288 ntBASIC1.48□□□□□ -2.17
MSH4O15457 AC019235.1-201ENST00000503847 207 ntBASIC1.48□□□□□ -2.17
MSH4O15457 AC096745.1-201ENST00000509945 370 ntBASIC1.48□□□□□ -2.17
MSH4O15457 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.48□□□□□ -2.17
MSH4O15457 MRPS36P4-201ENST00000534436 298 ntBASIC1.48□□□□□ -2.17
MSH4O15457 AC084364.2-201ENST00000546924 395 ntBASIC1.48□□□□□ -2.17
MSH4O15457 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.48□□□□□ -2.17
MSH4O15457 AC100830.2-201ENST00000581636 240 ntBASIC1.48□□□□□ -2.17
MSH4O15457 MIR3660-201ENST00000584845 100 ntBASIC1.48□□□□□ -2.17
MSH4O15457 AC012557.2-201ENST00000605919 418 ntBASIC1.48□□□□□ -2.17
MSH4O15457 AC004492.1-201ENST00000607036 742 ntBASIC1.48□□□□□ -2.17
MSH4O15457 AC015540.1-201ENST00000615828 501 ntBASIC1.48□□□□□ -2.17
MSH4O15457 AC005562.2-201ENST00000618264 111 ntBASIC1.48□□□□□ -2.17
MSH4O15457 AC099654.12-201ENST00000639868 649 ntBASIC1.48□□□□□ -2.17
MSH4O15457 Y_RNA.3-201ENST00000362331 103 ntBASIC1.47□□□□□ -2.17
MSH4O15457 RNU6-545P-201ENST00000362681 104 ntBASIC1.47□□□□□ -2.17
MSH4O15457 RNU6-562P-201ENST00000362731 107 ntBASIC1.47□□□□□ -2.17
MSH4O15457 RNU6-1090P-201ENST00000364065 94 ntBASIC1.47□□□□□ -2.17
MSH4O15457 RNU6-933P-201ENST00000384424 107 ntBASIC1.47□□□□□ -2.17
MSH4O15457 MIR30A-201ENST00000385092 71 ntBASIC1.47□□□□□ -2.17
MSH4O15457 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
MSH4O15457 SNORA40.6-201ENST00000391153 128 ntBASIC1.47□□□□□ -2.17
MSH4O15457 MIR450B-201ENST00000401182 78 ntBASIC1.47□□□□□ -2.17
MSH4O15457 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.47□□□□□ -2.17
MSH4O15457 RPL21P111-201ENST00000418453 477 ntBASIC1.47□□□□□ -2.17
MSH4O15457 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.47□□□□□ -2.17
MSH4O15457 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.47□□□□□ -2.17
MSH4O15457 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
MSH4O15457 AC091435.1-201ENST00000505442 584 ntBASIC1.47□□□□□ -2.17
MSH4O15457 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.47□□□□□ -2.17
MSH4O15457 RNU6-506P-201ENST00000516553 94 ntBASIC1.47□□□□□ -2.17
MSH4O15457 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.47□□□□□ -2.17
MSH4O15457 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
MSH4O15457 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.47□□□□□ -2.17
MSH4O15457 AC068338.1-201ENST00000565567 176 ntBASIC1.47□□□□□ -2.17
MSH4O15457 SNORA59B-202ENST00000578183 701 ntBASIC1.47□□□□□ -2.17
MSH4O15457 FGF7P1-201ENST00000582820 288 ntBASIC1.47□□□□□ -2.17
MSH4O15457 AC010525.2-201ENST00000590920 195 ntBASIC1.47□□□□□ -2.17
MSH4O15457 AC146944.4-201ENST00000602697 718 ntBASIC1.47□□□□□ -2.17
MSH4O15457 AL162413.1-201ENST00000603198 110 ntBASIC1.47□□□□□ -2.17
MSH4O15457 AC016727.2-201ENST00000603988 621 ntBASIC1.47□□□□□ -2.17
MSH4O15457 AC104458.1-201ENST00000608243 463 ntBASIC1.47□□□□□ -2.17
MSH4O15457 RMST_3.1-201ENST00000611651 109 ntBASIC1.47□□□□□ -2.17
MSH4O15457 AL353770.2-201ENST00000620024 78 ntBASIC1.47□□□□□ -2.17
MSH4O15457 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.47□□□□□ -2.17
MSH4O15457 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms