Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 OR56A5-201ENST00000340110 738 ntBASIC2.17□□□□□ -2.06
CLPTM1O96005 RNU6-874P-201ENST00000362390 105 ntBASIC2.17□□□□□ -2.06
CLPTM1O96005 RNU1-72P-201ENST00000362976 153 ntBASIC2.17□□□□□ -2.06
CLPTM1O96005 RNU6-490P-201ENST00000362985 107 ntBASIC2.17□□□□□ -2.06
CLPTM1O96005 RNY3P11-201ENST00000364153 102 ntBASIC2.17□□□□□ -2.06
CLPTM1O96005 RNU4-9P-201ENST00000364951 139 ntBASIC2.17□□□□□ -2.06
CLPTM1O96005 MIR32-201ENST00000384965 70 ntBASIC2.17□□□□□ -2.06
CLPTM1O96005 AL353752.1-201ENST00000454946 260 ntBASIC2.17□□□□□ -2.06
CLPTM1O96005 RNU6-717P-201ENST00000459076 104 ntBASIC2.17□□□□□ -2.06
CLPTM1O96005 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.17□□□□□ -2.06
CLPTM1O96005 AC109329.1-201ENST00000518744 317 ntBASIC2.17□□□□□ -2.06
CLPTM1O96005 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.17□□□□□ -2.06
CLPTM1O96005 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.17□□□□□ -2.06
CLPTM1O96005 AP003072.1-201ENST00000531740 145 ntBASIC2.17□□□□□ -2.06
CLPTM1O96005 AC021231.3-201ENST00000558497 370 ntBASIC2.17□□□□□ -2.06
CLPTM1O96005 SUB1P3-201ENST00000564581 315 ntBASIC2.17□□□□□ -2.06
CLPTM1O96005 SNRPGP17-201ENST00000603780 214 ntBASIC2.17□□□□□ -2.06
CLPTM1O96005 AC007485.1-201ENST00000616755 206 ntBASIC2.17□□□□□ -2.06
CLPTM1O96005 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CLPTM1O96005 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CLPTM1O96005 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CLPTM1O96005 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.16□□□□□ -2.06
CLPTM1O96005 MIR449A-201ENST00000362113 91 ntBASIC2.16□□□□□ -2.06
CLPTM1O96005 Y_RNA.112-201ENST00000363250 102 ntBASIC2.16□□□□□ -2.06
CLPTM1O96005 Y_RNA.128-201ENST00000363391 112 ntBASIC2.16□□□□□ -2.06
CLPTM1O96005 RNA5SP138-201ENST00000365098 114 ntBASIC2.16□□□□□ -2.06
CLPTM1O96005 Y_RNA.314-201ENST00000365114 102 ntBASIC2.16□□□□□ -2.06
CLPTM1O96005 XGY1-201ENST00000381172 446 ntBASIC2.16□□□□□ -2.06
CLPTM1O96005 RNU6-1032P-201ENST00000384100 107 ntBASIC2.16□□□□□ -2.06
CLPTM1O96005 MIR27B-201ENST00000385129 97 ntBASIC2.16□□□□□ -2.06
CLPTM1O96005 SNORA12.2-201ENST00000391040 156 ntBASIC2.16□□□□□ -2.06
CLPTM1O96005 RNU6-700P-201ENST00000391043 107 ntBASIC2.16□□□□□ -2.06
CLPTM1O96005 AL356379.1-201ENST00000414105 126 ntBASIC2.16□□□□□ -2.06
CLPTM1O96005 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.16□□□□□ -2.06
CLPTM1O96005 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.16□□□□□ -2.06
CLPTM1O96005 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.16□□□□□ -2.06
CLPTM1O96005 RN7SKP210-201ENST00000459176 261 ntBASIC2.16□□□□□ -2.06
CLPTM1O96005 Y_RNA.711-201ENST00000516993 102 ntBASIC2.16□□□□□ -2.06
CLPTM1O96005 RN7SKP295-201ENST00000517264 153 ntBASIC2.16□□□□□ -2.06
CLPTM1O96005 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.16□□□□□ -2.06
CLPTM1O96005 AC105245.1-201ENST00000581934 244 ntBASIC2.16□□□□□ -2.06
CLPTM1O96005 RPL30P11-203ENST00000598995 310 ntBASIC2.16□□□□□ -2.06
CLPTM1O96005 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.16□□□□□ -2.06
CLPTM1O96005 AL355802.3-201ENST00000607571 545 ntBASIC2.16□□□□□ -2.06
CLPTM1O96005 AC243829.7-201ENST00000633081 225 ntBASIC2.16□□□□□ -2.06
CLPTM1O96005 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.16□□□□□ -2.06
CLPTM1O96005 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.16□□□□□ -2.06
CLPTM1O96005 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.15□□□□□ -2.06
CLPTM1O96005 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.15□□□□□ -2.06
CLPTM1O96005 Y_RNA.252-201ENST00000364556 101 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 Y_RNA.428-201ENST00000384078 102 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 Y_RNA.577-201ENST00000384794 101 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 MIR17-201ENST00000385012 84 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 MIR549A-201ENST00000385268 96 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 RNU6-1156P-201ENST00000410365 100 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.15□□□□□ -2.07
CLPTM1O96005 AC012306.1-201ENST00000423267 114 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 MTCYBP10-201ENST00000424905 650 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 AC096644.2-201ENST00000429278 159 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 AL445305.1-201ENST00000432577 575 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.15□□□□□ -2.07
CLPTM1O96005 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.15□□□□□ -2.07
CLPTM1O96005 AL035666.1-201ENST00000446195 348 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 snoU13.30-201ENST00000458951 104 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 RNU7-169P-201ENST00000459456 61 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.15□□□□□ -2.07
CLPTM1O96005 RNU7-193P-201ENST00000516723 65 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 SCARNA3-201ENST00000517097 143 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 AC016256.1-201ENST00000547971 354 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 MIR3136-201ENST00000583498 78 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.15□□□□□ -2.07
CLPTM1O96005 AC006157.1-201ENST00000611750 366 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.15□□□□□ -2.07
CLPTM1O96005 AC040896.1-201ENST00000613819 479 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 AC090517.3-201ENST00000625170 141 ntBASIC2.15□□□□□ -2.07
CLPTM1O96005 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CLPTM1O96005 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
CLPTM1O96005 AC069528.2-201ENST00000624849 1991 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 RNU6-222P-201ENST00000362438 107 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 RNU4-15P-201ENST00000362613 141 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 SNORA63-201ENST00000363450 132 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 Y_RNA.148-201ENST00000363557 117 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 SNORA22B-201ENST00000383876 138 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 RNY1P14-201ENST00000384426 108 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 CBX3P9-201ENST00000402326 552 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 RNA5SP338-201ENST00000410495 85 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 AC009963.1-201ENST00000417265 157 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 AC007098.1-201ENST00000420122 367 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 AC018865.2-201ENST00000423631 129 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 MICF-203ENST00000432679 129 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 AL160004.2-201ENST00000432935 350 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.14□□□□□ -2.07
CLPTM1O96005 AC090515.1-201ENST00000465295 476 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 AL163540.1-201ENST00000485382 386 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 RNU7-175P-201ENST00000515915 61 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 SNORD116.3-201ENST00000517176 78 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.14□□□□□ -2.07
CLPTM1O96005 AC104581.2-201ENST00000572227 430 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 7SK.7-201ENST00000603504 247 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 AL670379.2-201ENST00000604983 252 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms