Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 Y_RNA.504-201ENST00000384481 104 ntBASIC2.1□□□□□ -2.07
CSNK1G3Q9Y6M4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CSNK1G3Q9Y6M4 AL445646.1-201ENST00000431784 216 ntBASIC2.1□□□□□ -2.07
CSNK1G3Q9Y6M4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.1□□□□□ -2.07
CSNK1G3Q9Y6M4 RPS27P21-201ENST00000486977 252 ntBASIC2.1□□□□□ -2.07
CSNK1G3Q9Y6M4 RPL30P1-201ENST00000488676 339 ntBASIC2.1□□□□□ -2.07
CSNK1G3Q9Y6M4 AC140059.1-201ENST00000489238 361 ntBASIC2.1□□□□□ -2.07
CSNK1G3Q9Y6M4 AC108210.2-201ENST00000503681 201 ntBASIC2.1□□□□□ -2.07
CSNK1G3Q9Y6M4 ACA59.1-201ENST00000515966 143 ntBASIC2.1□□□□□ -2.07
CSNK1G3Q9Y6M4 RNA5SP384-201ENST00000516615 116 ntBASIC2.1□□□□□ -2.07
CSNK1G3Q9Y6M4 Y_RNA.708-201ENST00000516950 96 ntBASIC2.1□□□□□ -2.07
CSNK1G3Q9Y6M4 AL078605.1-201ENST00000603529 500 ntBASIC2.1□□□□□ -2.07
CSNK1G3Q9Y6M4 AL713866.2-201ENST00000603579 219 ntBASIC2.1□□□□□ -2.07
CSNK1G3Q9Y6M4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.1□□□□□ -2.07
CSNK1G3Q9Y6M4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.1□□□□□ -2.07
CSNK1G3Q9Y6M4 MTND4LP32-201ENST00000636111 270 ntBASIC2.1□□□□□ -2.07
CSNK1G3Q9Y6M4 AL669831.3-213ENST00000636676 183 ntBASIC2.1□□□□□ -2.07
CSNK1G3Q9Y6M4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CSNK1G3Q9Y6M4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 AP000560.1-201ENST00000624150 1937 ntBASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 Y_RNA.48-201ENST00000362710 103 ntBASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 RNU6-1297P-201ENST00000384415 104 ntBASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 RNU6-482P-201ENST00000391068 107 ntBASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 SNORA75.4-201ENST00000391278 119 ntBASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 AL591034.2-201ENST00000402839 359 ntBASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 AC078809.1-201ENST00000427601 140 ntBASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 IFNA11P-201ENST00000446352 526 ntBASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 AC080013.2-201ENST00000460866 323 ntBASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 AC090515.1-201ENST00000465295 476 ntBASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 HMGB1P35-201ENST00000503360 598 ntBASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 AC016632.1-201ENST00000503994 196 ntBASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 AC005741.1-201ENST00000511094 432 ntBASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 MIR5571-201ENST00000577998 113 ntBASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 RPL30P11-203ENST00000598995 310 ntBASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 AC069294.1-201ENST00000608397 350 ntBASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 AC009318.2-201ENST00000610917 651 ntBASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 SNORD98-201ENST00000636377 67 ntBASIC2.09□□□□□ -2.07
CSNK1G3Q9Y6M4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
CSNK1G3Q9Y6M4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CSNK1G3Q9Y6M4 MTND4P1-201ENST00000457501 1466 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 RNU4-79P-201ENST00000362764 141 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 RNU6-1032P-201ENST00000384100 107 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 SNORA29-201ENST00000384183 140 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 Y_RNA.533-201ENST00000384596 114 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 RNU6-310P-201ENST00000384655 107 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 CBX3P9-201ENST00000402326 552 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 AL023284.1-201ENST00000403956 276 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 Y_RNA.646-201ENST00000410980 101 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 AL590135.1-201ENST00000422215 156 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 EIF4EP2-201ENST00000422816 654 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 AC019205.3-201ENST00000424573 156 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 GPM6BP3-201ENST00000442797 145 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 AC016700.2-201ENST00000446011 156 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 AF186996.7-201ENST00000492781 209 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 AC104564.1-201ENST00000493028 407 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 AC015911.1-201ENST00000495111 156 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 Y_RNA.675-201ENST00000516389 149 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 AC115990.1-201ENST00000526957 301 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 AC007375.1-201ENST00000554513 578 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 MTND5P9-201ENST00000503854 1755 ntBASIC2.08□□□□□ -2.08
CSNK1G3Q9Y6M4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 AC092268.1-201ENST00000342691 405 ntBASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 Y_RNA.2-201ENST00000362330 96 ntBASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 snoU2_19.1-201ENST00000362361 80 ntBASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 Y_RNA.61-201ENST00000362835 102 ntBASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 RNU5B-2P-201ENST00000363036 113 ntBASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 RNU6-1286P-201ENST00000383871 107 ntBASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 Y_RNA.384-201ENST00000383909 102 ntBASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 RNU6-331P-201ENST00000384724 107 ntBASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 MIR764-201ENST00000390811 85 ntBASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 RNY4P36-201ENST00000391116 96 ntBASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 EIF1AXP1-201ENST00000419267 435 ntBASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 MTCO3P10-201ENST00000455912 772 ntBASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 SNORD19B-201ENST00000459623 84 ntBASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 AC104435.1-201ENST00000483483 166 ntBASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 AC021146.2-201ENST00000504736 556 ntBASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 Y_RNA.718-201ENST00000517110 102 ntBASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 CBX3P8-201ENST00000532412 525 ntBASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 MIR5696-201ENST00000578474 85 ntBASIC2.07□□□□□ -2.08
CSNK1G3Q9Y6M4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms