Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC002543.1-201ENST00000299783 1954 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 Y_RNA.148-201ENST00000363557 117 ntBASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 RNU1-51P-201ENST00000365345 176 ntBASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 SNORA36A-201ENST00000384221 132 ntBASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 RNU6-301P-201ENST00000384277 107 ntBASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 Y_RNA.577-201ENST00000384794 101 ntBASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 MIR524-201ENST00000385242 87 ntBASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 AL590004.1-201ENST00000405321 300 ntBASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 MCFD2P1-201ENST00000417812 300 ntBASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 AL358453.1-201ENST00000422522 250 ntBASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 RPL23AP50-201ENST00000434149 455 ntBASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 CHEK2P4-201ENST00000450340 246 ntBASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 AL139109.1-201ENST00000455491 297 ntBASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 AC104564.1-201ENST00000493028 407 ntBASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 HSPE1P4-201ENST00000550617 308 ntBASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 MIR5007-201ENST00000583098 95 ntBASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 AC007485.1-201ENST00000616755 206 ntBASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 AC064859.1-201ENST00000624741 174 ntBASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 AC138305.3-201ENST00000624988 240 ntBASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
SNX9Q9Y5X1 AP000560.1-201ENST00000624150 1937 ntBASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 SNORA63-201ENST00000363450 132 ntBASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 SNORA33.2-201ENST00000365413 134 ntBASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 RNU6-1156P-201ENST00000410365 100 ntBASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 EIF1AXP1-201ENST00000419267 435 ntBASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 AC244670.1-201ENST00000436879 112 ntBASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 AC011753.1-201ENST00000451001 220 ntBASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 AC080013.2-201ENST00000460866 323 ntBASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 AC105758.1-201ENST00000506038 399 ntBASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 RNU6-264P-201ENST00000517134 104 ntBASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 RN7SKP295-201ENST00000517264 153 ntBASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 AC016256.1-201ENST00000547971 354 ntBASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 AC105137.2-201ENST00000569073 466 ntBASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 AC104581.2-201ENST00000572227 430 ntBASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 AC007336.1-201ENST00000576365 3828 ntBASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 MIR5694-201ENST00000581190 76 ntBASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 AC087588.2-201ENST00000617667 426 ntBASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.47□□□□□ -2.01
SNX9Q9Y5X1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
SNX9Q9Y5X1 AC233981.2-201ENST00000611524 1614 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 SNORD114-19-201ENST00000363072 75 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 Y_RNA.202-201ENST00000364083 110 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 RNU1-115P-201ENST00000365329 160 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 RNU6-1032P-201ENST00000384100 107 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 Y_RNA.504-201ENST00000384481 104 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 SNORA12.2-201ENST00000391040 156 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 SNORA3.2-201ENST00000408221 125 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 MTCO3P29-201ENST00000432119 779 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 AC012308.1-201ENST00000451232 178 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 AL441985.1-201ENST00000457727 251 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 AC112771.1-201ENST00000463581 102 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 AC016632.1-201ENST00000503994 196 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 RNU5F-2P-201ENST00000516066 82 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 RNU4-77P-201ENST00000516692 156 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 SNORA31.16-201ENST00000516773 139 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 RNU6-1137P-201ENST00000517073 99 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 AL590705.4-201ENST00000532209 134 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 AC007375.1-201ENST00000554513 578 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 AC096772.1-201ENST00000609146 564 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 AC245884.12-201ENST00000615364 59 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 AC007792.1-201ENST00000623023 402 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 SCARNA4-201ENST00000629045 128 ntBASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SNX9Q9Y5X1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 SNORA63C-201ENST00000364578 129 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 RNU1-91P-201ENST00000364746 163 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 Y_RNA.405-201ENST00000383979 100 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 RNU6-968P-201ENST00000384076 107 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 Y_RNA.428-201ENST00000384078 102 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 Y_RNA.451-201ENST00000384200 100 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 Y_RNA.524-201ENST00000384564 100 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 Y_RNA.561-201ENST00000384694 100 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 Z98742.3-201ENST00000418637 326 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 Z98742.2-201ENST00000431564 187 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 AL160004.2-201ENST00000432935 350 ntBASIC2.45□□□□□ -2.02
SNX9Q9Y5X1 AC018634.1-201ENST00000437554 401 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms