Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 RNU6-835P-201ENST00000516974 104 ntBASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 RNU1-92P-201ENST00000517017 135 ntBASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 RNU6-323P-201ENST00000521915 107 ntBASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 AC016256.1-201ENST00000547971 354 ntBASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 AC080013.6-201ENST00000606185 215 ntBASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 AL357078.3-201ENST00000607528 618 ntBASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 AL157834.3-201ENST00000615543 103 ntBASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 AL359314.1-201ENST00000616913 261 ntBASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 RNU6-743P-201ENST00000364151 106 ntBASIC1.86□□□□□ -2.11
NPC1L1Q9UHC9 SNORD32B-201ENST00000364460 84 ntBASIC1.86□□□□□ -2.11
NPC1L1Q9UHC9 RNU6-26P-201ENST00000383985 107 ntBASIC1.86□□□□□ -2.11
NPC1L1Q9UHC9 RNU6-214P-201ENST00000384130 107 ntBASIC1.86□□□□□ -2.11
NPC1L1Q9UHC9 RNU6-648P-201ENST00000410190 107 ntBASIC1.86□□□□□ -2.11
NPC1L1Q9UHC9 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.86□□□□□ -2.11
NPC1L1Q9UHC9 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.86□□□□□ -2.11
NPC1L1Q9UHC9 MTND3P16-201ENST00000452205 344 ntBASIC1.86□□□□□ -2.11
NPC1L1Q9UHC9 AC004223.1-201ENST00000479840 271 ntBASIC1.86□□□□□ -2.11
NPC1L1Q9UHC9 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.86□□□□□ -2.11
NPC1L1Q9UHC9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.86□□□□□ -2.11
NPC1L1Q9UHC9 AC245505.1-201ENST00000556398 224 ntBASIC1.86□□□□□ -2.11
NPC1L1Q9UHC9 HMGB1P33-201ENST00000563485 527 ntBASIC1.86□□□□□ -2.11
NPC1L1Q9UHC9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.86□□□□□ -2.11
NPC1L1Q9UHC9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.86□□□□□ -2.11
NPC1L1Q9UHC9 MIR4452-201ENST00000583004 71 ntBASIC1.86□□□□□ -2.11
NPC1L1Q9UHC9 RPL17P51-201ENST00000605218 238 ntBASIC1.86□□□□□ -2.11
NPC1L1Q9UHC9 AC004492.1-201ENST00000607036 742 ntBASIC1.86□□□□□ -2.11
NPC1L1Q9UHC9 AC103591.3-201ENST00000608684 209 ntBASIC1.86□□□□□ -2.11
NPC1L1Q9UHC9 RNU6-623P-201ENST00000363143 105 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 U3.9-201ENST00000363823 204 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 RNU6-53P-201ENST00000365367 106 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 Y_RNA.504-201ENST00000384481 104 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 Y_RNA.540-201ENST00000384638 111 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 CALM2P3-201ENST00000400429 449 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 MTCO3P41-201ENST00000414801 328 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 MTND2P29-201ENST00000438595 412 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 AL359672.1-201ENST00000442302 409 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 AC005741.1-201ENST00000511094 432 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 AC068338.1-201ENST00000565567 176 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 AC092807.2-201ENST00000609367 243 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 DISC2.1-201ENST00000612827 205 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 AC068137.3-201ENST00000639191 341 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 AC121333.1-201ENST00000567488 2709 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 RNU6-227P-201ENST00000362865 103 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 Y_RNA.231-201ENST00000364358 102 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 Y_RNA.378-201ENST00000365652 113 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 RNU6-997P-201ENST00000384725 107 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 MIR1262-201ENST00000408276 93 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 FO393415.2-201ENST00000480085 343 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 AC019235.1-201ENST00000503847 207 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 AC093259.1-201ENST00000509755 300 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 RNU6-1281P-201ENST00000516223 105 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 SNORA31.16-201ENST00000516773 139 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 CYP4A27P-201ENST00000567218 190 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 CYP2C61P-201ENST00000604072 290 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 AL022345.1-201ENST00000607292 135 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 U1.36-201ENST00000620684 176 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 MIR1248-201ENST00000629190 106 ntBASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.85□□□□□ -2.11
NPC1L1Q9UHC9 AC009541.1-201ENST00000438279 2662 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 RNU1-58P-201ENST00000362413 163 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 RNU6-1329P-201ENST00000365664 107 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 Y_RNA.517-201ENST00000384551 106 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 RNU6-160P-201ENST00000384591 107 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 MIR514A2-201ENST00000385131 88 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 MIR514A3-201ENST00000385132 88 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 SNORD73A-201ENST00000386062 65 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 RNU11-3P-201ENST00000391111 133 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 AL033519.2-201ENST00000403958 392 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 AC244636.1-201ENST00000421152 228 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 UBE2V1P4-201ENST00000425374 344 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 ERLEC1P1-201ENST00000433806 578 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 RNA5SP57-201ENST00000459463 123 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 RNU6-1038P-201ENST00000516516 104 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 RNU6-506P-201ENST00000516553 94 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 RNU6-612P-201ENST00000516909 102 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 AC109446.1-201ENST00000566172 220 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 MIR5692C1-201ENST00000585309 91 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 AC064807.4-201ENST00000607201 407 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 AC015540.1-201ENST00000615828 501 ntBASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
NPC1L1Q9UHC9 RNU4-20P-201ENST00000365601 151 ntBASIC1.83□□□□□ -2.12
NPC1L1Q9UHC9 MIR758-201ENST00000390227 88 ntBASIC1.83□□□□□ -2.12
NPC1L1Q9UHC9 RPL21P1-201ENST00000399532 476 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms