Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 USP9YP14-201ENST00000430663 563 ntBASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 AC245047.7-201ENST00000440265 293 ntBASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 AC007547.1-201ENST00000462177 490 ntBASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 SNORD79.1-201ENST00000516069 84 ntBASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 RNA5SP168-201ENST00000516642 112 ntBASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 SCARNA1-201ENST00000517138 166 ntBASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 AC018659.1-201ENST00000551083 169 ntBASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 AL121579.1-201ENST00000555129 305 ntBASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 MIR548AC-201ENST00000585049 88 ntBASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 AC096720.1-201ENST00000604441 183 ntBASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 AL034555.1-201ENST00000604816 211 ntBASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 AC106858.1-201ENST00000637497 429 ntBASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 AL445523.1-201ENST00000451184 1362 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 Y_RNA.46-201ENST00000362695 102 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 U3.9-201ENST00000363823 204 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 RNA5SP331-201ENST00000364986 107 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 SNORD12-201ENST00000391002 90 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 SNORD115.1-201ENST00000391109 76 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 AL356776.1-201ENST00000406574 447 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 RNU2-72P-201ENST00000411175 163 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 RPL23AP95-201ENST00000426806 265 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 AC002429.1-201ENST00000437672 148 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 MTND3P25-201ENST00000509243 135 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 AC117522.1-201ENST00000509821 380 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 AC011406.1-201ENST00000512440 370 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 RNU1-86P-201ENST00000516108 154 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 RNU1-107P-201ENST00000516617 154 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 AC012507.3-201ENST00000603556 477 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 AC105148.1-201ENST00000604961 409 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 BCRP9-201ENST00000605312 388 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 AC105129.3-201ENST00000605455 485 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 MTND4P14-201ENST00000435799 1354 ntBASIC0.33□□□□□ -2.36
PHRF1Q9P1Y6 RNU6-562P-201ENST00000362731 107 ntBASIC0.32□□□□□ -2.36
PHRF1Q9P1Y6 RNU6-78P-201ENST00000362897 107 ntBASIC0.32□□□□□ -2.36
PHRF1Q9P1Y6 RNA5SP259-201ENST00000365541 109 ntBASIC0.32□□□□□ -2.36
PHRF1Q9P1Y6 MIR578-201ENST00000384828 96 ntBASIC0.32□□□□□ -2.36
PHRF1Q9P1Y6 MIR653-201ENST00000385279 96 ntBASIC0.32□□□□□ -2.36
PHRF1Q9P1Y6 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.32□□□□□ -2.36
PHRF1Q9P1Y6 AC063976.4-201ENST00000421971 163 ntBASIC0.32□□□□□ -2.36
PHRF1Q9P1Y6 RPL37P21-201ENST00000435890 276 ntBASIC0.32□□□□□ -2.36
PHRF1Q9P1Y6 AL117351.1-201ENST00000438864 766 ntBASIC0.32□□□□□ -2.36
PHRF1Q9P1Y6 GAPDHP17-201ENST00000449858 1001 ntBASIC0.32□□□□□ -2.36
PHRF1Q9P1Y6 AC113410.1-201ENST00000505029 247 ntBASIC0.32□□□□□ -2.36
PHRF1Q9P1Y6 RNU6-1041P-201ENST00000516254 102 ntBASIC0.32□□□□□ -2.36
PHRF1Q9P1Y6 RNA5SP255-201ENST00000516370 107 ntBASIC0.32□□□□□ -2.36
PHRF1Q9P1Y6 AP002453.2-201ENST00000533503 320 ntBASIC0.32□□□□□ -2.36
PHRF1Q9P1Y6 AC007834.2-201ENST00000536310 343 ntBASIC0.32□□□□□ -2.36
PHRF1Q9P1Y6 AC090517.1-201ENST00000569307 266 ntBASIC0.32□□□□□ -2.36
PHRF1Q9P1Y6 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.32□□□□□ -2.36
PHRF1Q9P1Y6 RNU6-25P-201ENST00000383873 107 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 RNU6-48P-201ENST00000384161 107 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 Y_RNA.476-201ENST00000384347 108 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 SNORA80D-201ENST00000384488 135 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 RNU6-15P-201ENST00000384534 107 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 RNU6-29P-201ENST00000384637 107 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 MIR548B-201ENST00000385247 97 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC010975.2-201ENST00000427781 588 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AL133396.1-201ENST00000432048 687 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC013470.1-201ENST00000453438 462 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC010531.2-201ENST00000465012 153 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC104982.1-201ENST00000478775 574 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC008088.1-201ENST00000580993 280 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC025627.3-201ENST00000582078 182 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 MIR4307-201ENST00000582802 84 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC008521.1-201ENST00000587471 187 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC091965.4-201ENST00000607691 587 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 FAM157A-202ENST00000615155 405 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC092268.1-201ENST00000342691 405 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 RNU6-545P-201ENST00000362681 104 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 MIR329-1-201ENST00000385028 80 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 MIR300-201ENST00000401138 83 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 RPS29P13-201ENST00000402041 169 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 RNU6-387P-201ENST00000411331 105 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 MTATP6P20-201ENST00000414147 562 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 CDK8P2-201ENST00000415020 547 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 COX6CP6-201ENST00000490840 228 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 RPS26P48-201ENST00000491713 339 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 HMGN1P12-201ENST00000499125 195 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC008628.2-201ENST00000502605 298 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC079140.5-201ENST00000507882 310 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC112206.4-201ENST00000515142 405 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC109479.2-201ENST00000517842 174 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms