Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AC022254.1-201ENST00000567857 235 ntBASIC1.93□□□□□ -2.1
CHCHD3Q9NX63 POLR3GP2-201ENST00000588366 668 ntBASIC1.93□□□□□ -2.1
CHCHD3Q9NX63 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.93□□□□□ -2.1
CHCHD3Q9NX63 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.93□□□□□ -2.1
CHCHD3Q9NX63 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 Y_RNA.132-201ENST00000363421 102 ntBASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 SNORD115-32-201ENST00000364079 82 ntBASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 MIR597-201ENST00000384968 97 ntBASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 MIR221-201ENST00000385135 110 ntBASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 MIR1277-201ENST00000408536 78 ntBASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 RNA5SP501-201ENST00000410990 112 ntBASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 AC018634.1-201ENST00000437554 401 ntBASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 HSPE1P21-201ENST00000438283 308 ntBASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 AC130509.1-201ENST00000464158 433 ntBASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 AC027575.1-201ENST00000481064 460 ntBASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 RPS29P25-201ENST00000481709 171 ntBASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 MTCO2P30-201ENST00000503662 364 ntBASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 RNU6-1314P-201ENST00000517139 104 ntBASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 SUMO2P18-201ENST00000518873 252 ntBASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 AC124303.1-201ENST00000605703 360 ntBASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 AC116312.1-201ENST00000606841 314 ntBASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CHCHD3Q9NX63 RNU6-137P-201ENST00000363680 108 ntBASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 RNU4-9P-201ENST00000364951 139 ntBASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 SNORD116-11-201ENST00000383882 92 ntBASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 AL513185.2-201ENST00000425543 193 ntBASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 AL139415.2-201ENST00000431968 163 ntBASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 MTND4LP16-201ENST00000440828 295 ntBASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 AC009237.7-201ENST00000447357 229 ntBASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 snoU13.6-201ENST00000458785 104 ntBASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 AC087477.1-201ENST00000465747 340 ntBASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 YWHAEP4-201ENST00000505390 198 ntBASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 RNU6-864P-201ENST00000516256 108 ntBASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 MIR4285-201ENST00000581001 85 ntBASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 MIR5002-201ENST00000584713 97 ntBASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 AL590240.4-201ENST00000616908 390 ntBASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 AC090617.10-201ENST00000624308 134 ntBASIC1.91□□□□□ -2.1
CHCHD3Q9NX63 RNU5F-3P-201ENST00000363767 117 ntBASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 SNORD115-8-201ENST00000363856 82 ntBASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 SNORD115-38-201ENST00000365037 82 ntBASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 RNU6-596P-201ENST00000365395 98 ntBASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 SNORA18.2-201ENST00000383865 132 ntBASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 RNU6-245P-201ENST00000384020 107 ntBASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 RNU6-997P-201ENST00000384725 107 ntBASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 MIR517A-201ENST00000385001 87 ntBASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 SNRPEP8-201ENST00000442866 260 ntBASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 PPP1R2P5-201ENST00000457256 603 ntBASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 MTCYBP18-201ENST00000501056 747 ntBASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 RNU6-970P-201ENST00000516312 107 ntBASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 MIR3672-201ENST00000584290 82 ntBASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 MIR4753-201ENST00000585119 83 ntBASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 AC009318.2-201ENST00000610917 651 ntBASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 AL590808.1-201ENST00000618696 141 ntBASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 MIR3662-201ENST00000637030 95 ntBASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 BX322639.1-202ENST00000423987 2213 ntBASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 MTND5P9-201ENST00000503854 1755 ntBASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CHCHD3Q9NX63 MIR1283-1-201ENST00000408494 87 ntBASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 SNORA11.4-201ENST00000408823 129 ntBASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 RNA5SP425-201ENST00000410336 112 ntBASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 NCOR1P3-201ENST00000420479 303 ntBASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 AL139396.1-201ENST00000421137 167 ntBASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 EIF1P1-201ENST00000421436 341 ntBASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 AC139712.2-201ENST00000424302 339 ntBASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 AC027124.2-201ENST00000428249 105 ntBASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 AC079354.2-201ENST00000453523 154 ntBASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 MTND1P11-201ENST00000456661 876 ntBASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 AF186996.7-201ENST00000492781 209 ntBASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 AC067942.3-201ENST00000512025 362 ntBASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 SNORA44.1-201ENST00000517031 108 ntBASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 7SK.7-201ENST00000603504 247 ntBASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 AP000907.4-201ENST00000604143 237 ntBASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 MIR3976-201ENST00000606807 139 ntBASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 AC006504.8-201ENST00000621046 635 ntBASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 AC092881.1-201ENST00000638218 2733 ntBASIC1.89□□□□□ -2.11
CHCHD3Q9NX63 RNU4-82P-201ENST00000362443 140 ntBASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 RNU6-1252P-201ENST00000363054 104 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms