Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.82□□□□□ -1.96
COPB1P53618 RNU6-635P-201ENST00000516651 102 ntBASIC2.82□□□□□ -1.96
COPB1P53618 AL442163.3-201ENST00000554110 156 ntBASIC2.82□□□□□ -1.96
COPB1P53618 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
COPB1P53618 AC090617.3-201ENST00000573670 475 ntBASIC2.82□□□□□ -1.96
COPB1P53618 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.82□□□□□ -1.96
COPB1P53618 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
COPB1P53618 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.82□□□□□ -1.96
COPB1P53618 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.82□□□□□ -1.96
COPB1P53618 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.82□□□□□ -1.96
COPB1P53618 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COPB1P53618 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
COPB1P53618 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
COPB1P53618 MIR6073-201ENST00000352083 89 ntBASIC2.81□□□□□ -1.96
COPB1P53618 Y_RNA.40-201ENST00000362645 93 ntBASIC2.81□□□□□ -1.96
COPB1P53618 Y_RNA.214-201ENST00000364201 112 ntBASIC2.81□□□□□ -1.96
COPB1P53618 Y_RNA.276-201ENST00000364732 109 ntBASIC2.81□□□□□ -1.96
COPB1P53618 CD24P4-201ENST00000382840 243 ntBASIC2.81□□□□□ -1.96
COPB1P53618 RNU1-109P-201ENST00000383960 147 ntBASIC2.81□□□□□ -1.96
COPB1P53618 Y_RNA.452-201ENST00000384202 108 ntBASIC2.81□□□□□ -1.96
COPB1P53618 MIR9-1-201ENST00000385198 89 ntBASIC2.81□□□□□ -1.96
COPB1P53618 MIR153-2-201ENST00000385225 87 ntBASIC2.81□□□□□ -1.96
COPB1P53618 AC009414.1-201ENST00000427200 443 ntBASIC2.81□□□□□ -1.96
COPB1P53618 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.81□□□□□ -1.96
COPB1P53618 Z96811.1-201ENST00000445880 108 ntBASIC2.81□□□□□ -1.96
COPB1P53618 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.81□□□□□ -1.96
COPB1P53618 RPS27P26-201ENST00000494583 239 ntBASIC2.81□□□□□ -1.96
COPB1P53618 GZMAP1-201ENST00000503054 631 ntBASIC2.81□□□□□ -1.96
COPB1P53618 MIR2355-201ENST00000517199 87 ntBASIC2.81□□□□□ -1.96
COPB1P53618 AP002770.2-201ENST00000543613 532 ntBASIC2.81□□□□□ -1.96
COPB1P53618 AC021231.3-201ENST00000558497 370 ntBASIC2.81□□□□□ -1.96
COPB1P53618 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.81□□□□□ -1.96
COPB1P53618 AC007792.1-201ENST00000623023 402 ntBASIC2.81□□□□□ -1.96
COPB1P53618 AC010297.1-201ENST00000623948 149 ntBASIC2.81□□□□□ -1.96
COPB1P53618 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
COPB1P53618 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
COPB1P53618 RNU6-222P-201ENST00000362438 107 ntBASIC2.8□□□□□ -1.96
COPB1P53618 Y_RNA.27-201ENST00000362540 103 ntBASIC2.8□□□□□ -1.96
COPB1P53618 Y_RNA.210-201ENST00000364161 110 ntBASIC2.8□□□□□ -1.96
COPB1P53618 RNU4-50P-201ENST00000364361 141 ntBASIC2.8□□□□□ -1.96
COPB1P53618 SNORA51.11-201ENST00000384442 131 ntBASIC2.8□□□□□ -1.96
COPB1P53618 MIR628-201ENST00000385229 95 ntBASIC2.8□□□□□ -1.96
COPB1P53618 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
COPB1P53618 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.8□□□□□ -1.96
COPB1P53618 RNU7-87P-201ENST00000459343 62 ntBASIC2.8□□□□□ -1.96
COPB1P53618 snoU13.14-201ENST00000459372 104 ntBASIC2.8□□□□□ -1.96
COPB1P53618 AP001324.2-201ENST00000461163 319 ntBASIC2.8□□□□□ -1.96
COPB1P53618 AC010469.2-201ENST00000496412 480 ntBASIC2.8□□□□□ -1.96
COPB1P53618 SNORA31.16-201ENST00000516773 139 ntBASIC2.8□□□□□ -1.96
COPB1P53618 AC034114.1-201ENST00000520293 285 ntBASIC2.8□□□□□ -1.96
COPB1P53618 AC115990.1-201ENST00000526957 301 ntBASIC2.8□□□□□ -1.96
COPB1P53618 AC027288.2-201ENST00000553028 243 ntBASIC2.8□□□□□ -1.96
COPB1P53618 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.8□□□□□ -1.96
COPB1P53618 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.8□□□□□ -1.96
COPB1P53618 MIR3149-201ENST00000584629 83 ntBASIC2.8□□□□□ -1.96
COPB1P53618 RAC1P9-201ENST00000604990 392 ntBASIC2.8□□□□□ -1.96
COPB1P53618 AC013412.1-201ENST00000610687 192 ntBASIC2.8□□□□□ -1.96
COPB1P53618 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.8□□□□□ -1.96
COPB1P53618 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.8□□□□□ -1.96
COPB1P53618 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
COPB1P53618 Z75746.1-201ENST00000440243 2080 ntBASIC2.8□□□□□ -1.96
COPB1P53618 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.79□□□□□ -1.96
COPB1P53618 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.79□□□□□ -1.96
COPB1P53618 RNU1-105P-201ENST00000363470 161 ntBASIC2.79□□□□□ -1.96
COPB1P53618 RNU6-799P-201ENST00000363567 107 ntBASIC2.79□□□□□ -1.96
COPB1P53618 SNORD115-8-201ENST00000363856 82 ntBASIC2.79□□□□□ -1.96
COPB1P53618 Y_RNA.193-201ENST00000363979 102 ntBASIC2.79□□□□□ -1.96
COPB1P53618 U3.13-201ENST00000364804 214 ntBASIC2.79□□□□□ -1.96
COPB1P53618 SNORD115-38-201ENST00000365037 82 ntBASIC2.79□□□□□ -1.96
COPB1P53618 RNA5SP126-201ENST00000365092 109 ntBASIC2.79□□□□□ -1.96
COPB1P53618 RNY3P4-201ENST00000384428 101 ntBASIC2.79□□□□□ -1.96
COPB1P53618 MIR487A-201ENST00000385009 80 ntBASIC2.79□□□□□ -1.96
COPB1P53618 MIR147B-201ENST00000390185 80 ntBASIC2.79□□□□□ -1.96
COPB1P53618 RNU1-139P-201ENST00000391307 165 ntBASIC2.79□□□□□ -1.96
COPB1P53618 RNU6-130P-201ENST00000411112 103 ntBASIC2.79□□□□□ -1.96
COPB1P53618 HMGN2P35-201ENST00000412164 270 ntBASIC2.79□□□□□ -1.96
COPB1P53618 RPS26P42-201ENST00000413485 326 ntBASIC2.79□□□□□ -1.96
COPB1P53618 ELOCP20-201ENST00000422460 345 ntBASIC2.79□□□□□ -1.96
COPB1P53618 AIMP1P2-201ENST00000425294 312 ntBASIC2.79□□□□□ -1.96
COPB1P53618 EIF1P2-201ENST00000428233 350 ntBASIC2.79□□□□□ -1.96
COPB1P53618 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.79□□□□□ -1.96
COPB1P53618 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.79□□□□□ -1.96
COPB1P53618 RPS12P2-201ENST00000439728 269 ntBASIC2.79□□□□□ -1.96
COPB1P53618 AP000870.1-201ENST00000472927 406 ntBASIC2.79□□□□□ -1.96
COPB1P53618 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.79□□□□□ -1.96
COPB1P53618 AIG1P1-201ENST00000503376 148 ntBASIC2.79□□□□□ -1.96
COPB1P53618 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.79□□□□□ -1.96
COPB1P53618 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.79□□□□□ -1.96
COPB1P53618 RNU5F-2P-201ENST00000516066 82 ntBASIC2.79□□□□□ -1.96
COPB1P53618 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.79□□□□□ -1.96
COPB1P53618 AC090517.1-201ENST00000569307 266 ntBASIC2.79□□□□□ -1.96
COPB1P53618 MIR4319-201ENST00000577285 85 ntBASIC2.79□□□□□ -1.96
COPB1P53618 RPS29P30-201ENST00000600975 111 ntBASIC2.79□□□□□ -1.96
COPB1P53618 AL390123.1-201ENST00000603216 237 ntBASIC2.79□□□□□ -1.96
COPB1P53618 AC096772.1-201ENST00000609146 564 ntBASIC2.79□□□□□ -1.96
COPB1P53618 AC137590.2-201ENST00000619709 240 ntBASIC2.79□□□□□ -1.96
COPB1P53618 IGHVIII-44-202ENST00000636235 289 ntBASIC2.79□□□□□ -1.96
COPB1P53618 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
COPB1P53618 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
COPB1P53618 AC091564.4-201ENST00000533934 2194 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms