Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 EIF1AXP1-201ENST00000419267 435 ntBASIC1.95□□□□□ -2.1
PHF1O43189 MTCO2P27-201ENST00000420740 428 ntBASIC1.95□□□□□ -2.1
PHF1O43189 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.95□□□□□ -2.1
PHF1O43189 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PHF1O43189 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.95□□□□□ -2.1
PHF1O43189 MTCO3P10-201ENST00000455912 772 ntBASIC1.95□□□□□ -2.1
PHF1O43189 RPL7P42-201ENST00000481005 679 ntBASIC1.95□□□□□ -2.1
PHF1O43189 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.95□□□□□ -2.1
PHF1O43189 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.95□□□□□ -2.1
PHF1O43189 RNA5SP384-201ENST00000516615 116 ntBASIC1.95□□□□□ -2.1
PHF1O43189 RNU6-1213P-201ENST00000517075 94 ntBASIC1.95□□□□□ -2.1
PHF1O43189 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.95□□□□□ -2.1
PHF1O43189 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.95□□□□□ -2.1
PHF1O43189 MIR5701-3-201ENST00000578890 82 ntBASIC1.95□□□□□ -2.1
PHF1O43189 MIR5701-1-201ENST00000585138 82 ntBASIC1.95□□□□□ -2.1
PHF1O43189 MIR4781-201ENST00000585250 76 ntBASIC1.95□□□□□ -2.1
PHF1O43189 MIR5701-2-201ENST00000615634 82 ntBASIC1.95□□□□□ -2.1
PHF1O43189 AC126177.8-201ENST00000618339 1015 ntBASIC1.95□□□□□ -2.1
PHF1O43189 AL160413.1-201ENST00000622780 310 ntBASIC1.95□□□□□ -2.1
PHF1O43189 AC007792.1-201ENST00000623023 402 ntBASIC1.95□□□□□ -2.1
PHF1O43189 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.95□□□□□ -2.1
PHF1O43189 MIR7157-201ENST00000635801 60 ntBASIC1.95□□□□□ -2.1
PHF1O43189 MIR203B-201ENST00000636080 86 ntBASIC1.95□□□□□ -2.1
PHF1O43189 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
PHF1O43189 ZNF720P1-201ENST00000562403 1939 ntBASIC1.95□□□□□ -2.1
PHF1O43189 MTND5P9-201ENST00000503854 1755 ntBASIC1.95□□□□□ -2.1
PHF1O43189 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.94□□□□□ -2.1
PHF1O43189 AC131280.1-202ENST00000624067 4211 ntBASIC1.94□□□□□ -2.1
PHF1O43189 AL596028.1-201ENST00000326971 197 ntBASIC1.94□□□□□ -2.1
PHF1O43189 RNU5B-2P-201ENST00000363036 113 ntBASIC1.94□□□□□ -2.1
PHF1O43189 RNU6-486P-201ENST00000363116 107 ntBASIC1.94□□□□□ -2.1
PHF1O43189 Y_RNA.431-201ENST00000384086 102 ntBASIC1.94□□□□□ -2.1
PHF1O43189 Y_RNA.460-201ENST00000384255 102 ntBASIC1.94□□□□□ -2.1
PHF1O43189 Y_RNA.508-201ENST00000384502 114 ntBASIC1.94□□□□□ -2.1
PHF1O43189 MIR186-201ENST00000384988 86 ntBASIC1.94□□□□□ -2.1
PHF1O43189 AC097463.2-201ENST00000421074 142 ntBASIC1.94□□□□□ -2.1
PHF1O43189 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.94□□□□□ -2.1
PHF1O43189 EIF4EP4-201ENST00000424916 578 ntBASIC1.94□□□□□ -2.1
PHF1O43189 AC008267.5-201ENST00000424928 265 ntBASIC1.94□□□□□ -2.1
PHF1O43189 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.94□□□□□ -2.1
PHF1O43189 UBE2V1P7-201ENST00000446395 340 ntBASIC1.94□□□□□ -2.1
PHF1O43189 AC012308.1-201ENST00000451232 178 ntBASIC1.94□□□□□ -2.1
PHF1O43189 Y_RNA.639-201ENST00000458981 102 ntBASIC1.94□□□□□ -2.1
PHF1O43189 Y_RNA.653-201ENST00000459091 95 ntBASIC1.94□□□□□ -2.1
PHF1O43189 RN7SKP210-201ENST00000459176 261 ntBASIC1.94□□□□□ -2.1
PHF1O43189 AC112771.1-201ENST00000463581 102 ntBASIC1.94□□□□□ -2.1
PHF1O43189 RPL30P12-201ENST00000474666 353 ntBASIC1.94□□□□□ -2.1
PHF1O43189 AL121594.1-201ENST00000475906 575 ntBASIC1.94□□□□□ -2.1
PHF1O43189 RPL36AP48-201ENST00000485521 314 ntBASIC1.94□□□□□ -2.1
PHF1O43189 RPL30P1-201ENST00000488676 339 ntBASIC1.94□□□□□ -2.1
PHF1O43189 AC022447.4-201ENST00000504053 364 ntBASIC1.94□□□□□ -2.1
PHF1O43189 SMURF2P1-201ENST00000514992 481 ntBASIC1.94□□□□□ -2.1
PHF1O43189 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.94□□□□□ -2.1
PHF1O43189 RNA5SP112-201ENST00000515937 99 ntBASIC1.94□□□□□ -2.1
PHF1O43189 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.94□□□□□ -2.1
PHF1O43189 HSPE1P18-201ENST00000517602 280 ntBASIC1.94□□□□□ -2.1
PHF1O43189 AC115990.1-201ENST00000526957 301 ntBASIC1.94□□□□□ -2.1
PHF1O43189 AC121758.2-201ENST00000553271 193 ntBASIC1.94□□□□□ -2.1
PHF1O43189 AC105137.2-201ENST00000569073 466 ntBASIC1.94□□□□□ -2.1
PHF1O43189 MIR4498-201ENST00000577599 66 ntBASIC1.94□□□□□ -2.1
PHF1O43189 AC005899.2-201ENST00000584353 90 ntBASIC1.94□□□□□ -2.1
PHF1O43189 MIR4765-201ENST00000585007 77 ntBASIC1.94□□□□□ -2.1
PHF1O43189 AC073410.2-201ENST00000603240 332 ntBASIC1.94□□□□□ -2.1
PHF1O43189 AC005014.2-201ENST00000607795 599 ntBASIC1.94□□□□□ -2.1
PHF1O43189 MTND4P29-201ENST00000503122 1372 ntBASIC1.94□□□□□ -2.1
PHF1O43189 Z75746.1-201ENST00000440243 2080 ntBASIC1.94□□□□□ -2.1
PHF1O43189 ZNF299P-201ENST00000406845 1804 ntBASIC1.94□□□□□ -2.1
PHF1O43189 AC009541.1-201ENST00000438279 2662 ntBASIC1.93□□□□□ -2.1
PHF1O43189 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PHF1O43189 Y_RNA.123-201ENST00000363338 102 ntBASIC1.93□□□□□ -2.1
PHF1O43189 Y_RNA.187-201ENST00000363918 113 ntBASIC1.93□□□□□ -2.1
PHF1O43189 RNU6-595P-201ENST00000363944 107 ntBASIC1.93□□□□□ -2.1
PHF1O43189 Y_RNA.395-201ENST00000383945 109 ntBASIC1.93□□□□□ -2.1
PHF1O43189 RNU6-890P-201ENST00000384121 107 ntBASIC1.93□□□□□ -2.1
PHF1O43189 U6atac.2-201ENST00000408644 118 ntBASIC1.93□□□□□ -2.1
PHF1O43189 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.93□□□□□ -2.1
PHF1O43189 AL358453.1-201ENST00000422522 250 ntBASIC1.93□□□□□ -2.1
PHF1O43189 Z98742.2-201ENST00000431564 187 ntBASIC1.93□□□□□ -2.1
PHF1O43189 RPS15AP28-201ENST00000435088 386 ntBASIC1.93□□□□□ -2.1
PHF1O43189 AC244670.1-201ENST00000436879 112 ntBASIC1.93□□□□□ -2.1
PHF1O43189 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.93□□□□□ -2.1
PHF1O43189 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.93□□□□□ -2.1
PHF1O43189 AC080013.2-201ENST00000460866 323 ntBASIC1.93□□□□□ -2.1
PHF1O43189 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.93□□□□□ -2.1
PHF1O43189 AC016632.1-201ENST00000503994 196 ntBASIC1.93□□□□□ -2.1
PHF1O43189 HMGN1P13-201ENST00000505795 138 ntBASIC1.93□□□□□ -2.1
PHF1O43189 RNU5F-2P-201ENST00000516066 82 ntBASIC1.93□□□□□ -2.1
PHF1O43189 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.93□□□□□ -2.1
PHF1O43189 CBX3P8-201ENST00000532412 525 ntBASIC1.93□□□□□ -2.1
PHF1O43189 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.93□□□□□ -2.1
PHF1O43189 AL078605.1-201ENST00000603529 500 ntBASIC1.93□□□□□ -2.1
PHF1O43189 SCARNA4-201ENST00000629045 128 ntBASIC1.93□□□□□ -2.1
PHF1O43189 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.93□□□□□ -2.1
PHF1O43189 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.93□□□□□ -2.1
PHF1O43189 AC016717.2-201ENST00000609089 5141 ntBASIC1.93□□□□□ -2.1
PHF1O43189 RNU6-1115P-201ENST00000362490 106 ntBASIC1.92□□□□□ -2.1
PHF1O43189 RNU6-1210P-201ENST00000363775 107 ntBASIC1.92□□□□□ -2.1
PHF1O43189 Y_RNA.394-201ENST00000383942 103 ntBASIC1.92□□□□□ -2.1
PHF1O43189 SNORA6-201ENST00000384033 151 ntBASIC1.92□□□□□ -2.1
PHF1O43189 Y_RNA.533-201ENST00000384596 114 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms