Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 RNU6-641P-201ENST00000384006 107 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 MIR558-201ENST00000384920 94 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 MTCYBP36-201ENST00000404146 440 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 RNU2-3P-201ENST00000410144 191 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 RNU6-293P-201ENST00000411259 106 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 RNU6-607P-201ENST00000411283 108 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 MTND2P9-201ENST00000422293 931 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 CALM2P2-201ENST00000428512 440 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 snoU13.30-201ENST00000458951 104 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 SNRPGP7-201ENST00000469016 106 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 AL133373.1-201ENST00000497098 94 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 UBL5P1-201ENST00000507979 193 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 AC074344.1-201ENST00000512823 224 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 RNU7-40P-201ENST00000516397 64 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 RNA5SP481-201ENST00000516814 122 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.72□□□□□ -2.29
SCAF11Q99590 AP003181.2-201ENST00000528941 181 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 AC008752.3-201ENST00000588113 712 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 AC110760.3-201ENST00000598794 467 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 AC010620.1-201ENST00000601088 1102 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 AC106800.4-201ENST00000614905 153 ntBASIC0.72□□□□□ -2.29
SCAF11Q99590 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
SCAF11Q99590 HSBP1P2-201ENST00000299671 229 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 RNU6-660P-201ENST00000364566 109 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 RNU4-56P-201ENST00000364700 142 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 RNU6-533P-201ENST00000384144 107 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 RNU6-1200P-201ENST00000384162 107 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 MIR548B-201ENST00000385247 97 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 SNORA12.2-201ENST00000391040 156 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
SCAF11Q99590 AL355143.1-201ENST00000407101 841 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 MTCYBP2-201ENST00000407745 171 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.71□□□□□ -2.3
SCAF11Q99590 MED13P1-201ENST00000428342 171 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 AC244670.1-201ENST00000436879 112 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 RPS24P1-201ENST00000438550 371 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 MTATP6P14-201ENST00000455189 673 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 RPL31P3-201ENST00000458430 332 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 AL163195.1-201ENST00000496941 348 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.71□□□□□ -2.3
SCAF11Q99590 RNA5SP404-201ENST00000517118 132 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 SCARNA1-201ENST00000517138 166 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 RNA5SP437-201ENST00000517249 129 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.71□□□□□ -2.3
SCAF11Q99590 AC090888.2-201ENST00000559765 1144 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 AC069114.2-201ENST00000604699 304 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 AC006927.4-201ENST00000639187 543 ntBASIC0.71□□□□□ -2.3
SCAF11Q99590 Y_RNA.136-201ENST00000363444 102 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 RNU6-1141P-201ENST00000364520 107 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 RNU6-1065P-201ENST00000384513 106 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 RNU6-1176P-201ENST00000390955 107 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 ARL5AP1-201ENST00000418991 388 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 ELOCP4-201ENST00000420090 333 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 AL590135.1-201ENST00000422215 156 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 AC019205.3-201ENST00000424573 156 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 AC010975.2-201ENST00000427781 588 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.7□□□□□ -2.3
SCAF11Q99590 AC016700.2-201ENST00000446011 156 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 AC132479.1-201ENST00000449160 144 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 RNU7-14P-201ENST00000459331 62 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 HMGN2P9-201ENST00000476875 229 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 TRBVB-201ENST00000477100 408 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 AC015911.1-201ENST00000495111 156 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.7□□□□□ -2.3
SCAF11Q99590 SNORD60.2-201ENST00000516883 86 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.7□□□□□ -2.3
SCAF11Q99590 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.7□□□□□ -2.3
SCAF11Q99590 EIF4A1P12-201ENST00000551910 141 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.7□□□□□ -2.3
SCAF11Q99590 AC091489.2-201ENST00000566263 604 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 AC015688.6-201ENST00000577737 104 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 MIR3923-201ENST00000579521 83 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.7□□□□□ -2.3
SCAF11Q99590 MIR4999-201ENST00000585029 91 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 AC073539.2-201ENST00000597113 165 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 AL359999.1-201ENST00000604513 294 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 AC105129.3-201ENST00000605455 485 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 AC009033.1-201ENST00000624279 431 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 AC099654.5-201ENST00000636479 350 ntBASIC0.7□□□□□ -2.3
SCAF11Q99590 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.7□□□□□ -2.3
SCAF11Q99590 RNU4-67P-201ENST00000364569 141 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 RNU6-25P-201ENST00000383873 107 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 SNORA32.2-201ENST00000384049 122 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 RNU6-48P-201ENST00000384161 107 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 RNU6-43P-201ENST00000384302 107 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 RNU6-15P-201ENST00000384534 107 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 RNU6-29P-201ENST00000384637 107 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 RNU6-906P-201ENST00000384700 70 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 MIR122-201ENST00000385044 85 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 RNU6-387P-201ENST00000411331 105 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 MTCO1P21-201ENST00000416634 589 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 SNX2P2-201ENST00000424553 323 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 AC078809.1-201ENST00000427601 140 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.69□□□□□ -2.3
SCAF11Q99590 PGBD4P5-201ENST00000445958 426 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.69□□□□□ -2.3
SCAF11Q99590 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.69□□□□□ -2.3
SCAF11Q99590 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms