Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SNORA11.1-201ENST00000408133 129 ntBASIC2.05□□□□□ -2.08
VPS33AQ96AX1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.05□□□□□ -2.08
VPS33AQ96AX1 RPL23AP6-201ENST00000446637 472 ntBASIC2.05□□□□□ -2.08
VPS33AQ96AX1 AL021397.1-201ENST00000451806 248 ntBASIC2.05□□□□□ -2.08
VPS33AQ96AX1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.05□□□□□ -2.08
VPS33AQ96AX1 RNU6-1098P-201ENST00000516772 96 ntBASIC2.05□□□□□ -2.08
VPS33AQ96AX1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.05□□□□□ -2.08
VPS33AQ96AX1 AP005660.1-201ENST00000522972 293 ntBASIC2.05□□□□□ -2.08
VPS33AQ96AX1 AC008749.1-201ENST00000597650 306 ntBASIC2.05□□□□□ -2.08
VPS33AQ96AX1 AC146944.4-201ENST00000602697 718 ntBASIC2.05□□□□□ -2.08
VPS33AQ96AX1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.05□□□□□ -2.08
VPS33AQ96AX1 uc_338.20-201ENST00000621563 178 ntBASIC2.05□□□□□ -2.08
VPS33AQ96AX1 MIR6132-201ENST00000622083 109 ntBASIC2.05□□□□□ -2.08
VPS33AQ96AX1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
VPS33AQ96AX1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.04□□□□□ -2.08
VPS33AQ96AX1 RNA5SP493-201ENST00000364115 91 ntBASIC2.04□□□□□ -2.08
VPS33AQ96AX1 Y_RNA.414-201ENST00000384011 101 ntBASIC2.04□□□□□ -2.08
VPS33AQ96AX1 RNU6-1215P-201ENST00000384441 102 ntBASIC2.04□□□□□ -2.08
VPS33AQ96AX1 AL033519.2-201ENST00000403958 392 ntBASIC2.04□□□□□ -2.08
VPS33AQ96AX1 RNA5SP494-201ENST00000410653 129 ntBASIC2.04□□□□□ -2.08
VPS33AQ96AX1 AL139413.1-201ENST00000421309 217 ntBASIC2.04□□□□□ -2.08
VPS33AQ96AX1 RPL23AP83-201ENST00000434984 473 ntBASIC2.04□□□□□ -2.08
VPS33AQ96AX1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS33AQ96AX1 MTCO3P18-201ENST00000440206 761 ntBASIC2.04□□□□□ -2.08
VPS33AQ96AX1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.04□□□□□ -2.08
VPS33AQ96AX1 RNU7-14P-201ENST00000459331 62 ntBASIC2.04□□□□□ -2.08
VPS33AQ96AX1 AC091435.1-201ENST00000505442 584 ntBASIC2.04□□□□□ -2.08
VPS33AQ96AX1 RNA5SP200-201ENST00000516360 103 ntBASIC2.04□□□□□ -2.08
VPS33AQ96AX1 RNA5SP364-201ENST00000516938 78 ntBASIC2.04□□□□□ -2.08
VPS33AQ96AX1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS33AQ96AX1 AC026470.2-201ENST00000561492 181 ntBASIC2.04□□□□□ -2.08
VPS33AQ96AX1 MIR3169-201ENST00000578032 83 ntBASIC2.04□□□□□ -2.08
VPS33AQ96AX1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.04□□□□□ -2.08
VPS33AQ96AX1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS33AQ96AX1 AL138726.1-201ENST00000614873 333 ntBASIC2.04□□□□□ -2.08
VPS33AQ96AX1 AC091932.3-201ENST00000624223 323 ntBASIC2.04□□□□□ -2.08
VPS33AQ96AX1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
VPS33AQ96AX1 MTND5P6-201ENST00000422338 1798 ntBASIC2.03□□□□□ -2.08
VPS33AQ96AX1 CBX3P1-201ENST00000325243 554 ntBASIC2.03□□□□□ -2.08
VPS33AQ96AX1 Y_RNA.89-201ENST00000363031 102 ntBASIC2.03□□□□□ -2.08
VPS33AQ96AX1 Y_RNA.135-201ENST00000363439 95 ntBASIC2.03□□□□□ -2.08
VPS33AQ96AX1 RNU4-12P-201ENST00000365233 139 ntBASIC2.03□□□□□ -2.08
VPS33AQ96AX1 RNU6-877P-201ENST00000383868 107 ntBASIC2.03□□□□□ -2.08
VPS33AQ96AX1 SNORA48.1-201ENST00000390879 135 ntBASIC2.03□□□□□ -2.08
VPS33AQ96AX1 AC016925.1-201ENST00000458303 298 ntBASIC2.03□□□□□ -2.08
VPS33AQ96AX1 snoU13.6-201ENST00000458785 104 ntBASIC2.03□□□□□ -2.08
VPS33AQ96AX1 TOMM22P6-201ENST00000465035 409 ntBASIC2.03□□□□□ -2.08
VPS33AQ96AX1 RPS23P5-201ENST00000495419 428 ntBASIC2.03□□□□□ -2.08
VPS33AQ96AX1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.03□□□□□ -2.08
VPS33AQ96AX1 RNU6-256P-201ENST00000516747 97 ntBASIC2.03□□□□□ -2.08
VPS33AQ96AX1 BNIP3P22-201ENST00000593399 556 ntBASIC2.03□□□□□ -2.08
VPS33AQ96AX1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS33AQ96AX1 AL590240.4-201ENST00000616908 390 ntBASIC2.03□□□□□ -2.08
VPS33AQ96AX1 AC137590.2-201ENST00000619709 240 ntBASIC2.03□□□□□ -2.08
VPS33AQ96AX1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS33AQ96AX1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VPS33AQ96AX1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
VPS33AQ96AX1 RNU6-562P-201ENST00000362731 107 ntBASIC2.02□□□□□ -2.09
VPS33AQ96AX1 RNU6-534P-201ENST00000364877 106 ntBASIC2.02□□□□□ -2.09
VPS33AQ96AX1 RNU6-1026P-201ENST00000384465 108 ntBASIC2.02□□□□□ -2.09
VPS33AQ96AX1 RNA5SP501-201ENST00000410990 112 ntBASIC2.02□□□□□ -2.09
VPS33AQ96AX1 AC009161.1-201ENST00000417306 376 ntBASIC2.02□□□□□ -2.09
VPS33AQ96AX1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS33AQ96AX1 DAP3P1-201ENST00000441522 278 ntBASIC2.02□□□□□ -2.09
VPS33AQ96AX1 AL513124.1-201ENST00000450410 614 ntBASIC2.02□□□□□ -2.09
VPS33AQ96AX1 RNU7-187P-201ENST00000458985 68 ntBASIC2.02□□□□□ -2.09
VPS33AQ96AX1 AC005786.1-201ENST00000588553 154 ntBASIC2.02□□□□□ -2.09
VPS33AQ96AX1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS33AQ96AX1 AC005296.1-201ENST00000616145 209 ntBASIC2.02□□□□□ -2.09
VPS33AQ96AX1 AL359697.1-201ENST00000624879 587 ntBASIC2.02□□□□□ -2.09
VPS33AQ96AX1 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS33AQ96AX1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
VPS33AQ96AX1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS33AQ96AX1 RNU6-1252P-201ENST00000363054 104 ntBASIC2.01□□□□□ -2.09
VPS33AQ96AX1 Y_RNA.157-201ENST00000363638 102 ntBASIC2.01□□□□□ -2.09
VPS33AQ96AX1 SNORD114-6-201ENST00000364393 72 ntBASIC2.01□□□□□ -2.09
VPS33AQ96AX1 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
VPS33AQ96AX1 RNU6-95P-201ENST00000384697 107 ntBASIC2.01□□□□□ -2.09
VPS33AQ96AX1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
VPS33AQ96AX1 OR2AQ1P-201ENST00000451972 200 ntBASIC2.01□□□□□ -2.09
VPS33AQ96AX1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.01□□□□□ -2.09
VPS33AQ96AX1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.01□□□□□ -2.09
VPS33AQ96AX1 MRPS36P4-201ENST00000534436 298 ntBASIC2.01□□□□□ -2.09
VPS33AQ96AX1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS33AQ96AX1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS33AQ96AX1 ANP32BP3-201ENST00000559213 706 ntBASIC2.01□□□□□ -2.09
VPS33AQ96AX1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS33AQ96AX1 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS33AQ96AX1 AC023043.2-201ENST00000589678 1026 ntBASIC2.01□□□□□ -2.09
VPS33AQ96AX1 AL136360.1-201ENST00000503377 1900 ntBASIC2.01□□□□□ -2.09
VPS33AQ96AX1 Y_RNA.6-201ENST00000362350 114 ntBASIC2□□□□□ -2.09
VPS33AQ96AX1 Y_RNA.212-201ENST00000364177 102 ntBASIC2□□□□□ -2.09
VPS33AQ96AX1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2□□□□□ -2.09
VPS33AQ96AX1 AL356432.1-201ENST00000405809 419 ntBASIC2□□□□□ -2.09
VPS33AQ96AX1 AC009310.1-201ENST00000414414 451 ntBASIC2□□□□□ -2.09
VPS33AQ96AX1 AL353572.1-201ENST00000442490 417 ntBASIC2□□□□□ -2.09
VPS33AQ96AX1 SNRPEP8-201ENST00000442866 260 ntBASIC2□□□□□ -2.09
VPS33AQ96AX1 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2□□□□□ -2.09
VPS33AQ96AX1 AL353705.4-201ENST00000449661 238 ntBASIC2□□□□□ -2.09
VPS33AQ96AX1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms