Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC091152.3-201ENST00000604227 325 ntBASIC3.47□□□□□ -1.85
RTF1Q92541 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.47□□□□□ -1.85
RTF1Q92541 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.47□□□□□ -1.85
RTF1Q92541 ZNF72P-201ENST00000425869 1908 ntBASIC3.46□□□□□ -1.85
RTF1Q92541 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 RNA5SP68-201ENST00000363885 119 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 RNU6-748P-201ENST00000384648 107 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 MIR181B1-201ENST00000385240 110 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 RNU6-1109P-201ENST00000391187 107 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
RTF1Q92541 AC078809.1-201ENST00000427601 140 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.46□□□□□ -1.86
RTF1Q92541 AL353705.4-201ENST00000449661 238 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 AC016632.1-201ENST00000503994 196 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 MRPS35P2-201ENST00000508242 191 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 RNU5B-3P-201ENST00000516601 115 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.46□□□□□ -1.86
RTF1Q92541 MIR5571-201ENST00000577998 113 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 MIR3671-201ENST00000580455 88 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 MIR4635-201ENST00000583759 79 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 MIR3149-201ENST00000584629 83 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 AL355877.2-201ENST00000603670 358 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 RNU6-91P-201ENST00000607774 107 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 RMST_6.1-201ENST00000611980 203 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 SNORA43.4-201ENST00000629559 138 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RTF1Q92541 RBBP8P1-201ENST00000449447 1844 ntBASIC3.46□□□□□ -1.86
RTF1Q92541 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
RTF1Q92541 Y_RNA.276-201ENST00000364732 109 ntBASIC3.45□□□□□ -1.86
RTF1Q92541 U3.13-201ENST00000364804 214 ntBASIC3.45□□□□□ -1.86
RTF1Q92541 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
RTF1Q92541 RNU6-574P-201ENST00000384265 107 ntBASIC3.45□□□□□ -1.86
RTF1Q92541 RNU6-19P-201ENST00000384718 107 ntBASIC3.45□□□□□ -1.86
RTF1Q92541 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.45□□□□□ -1.86
RTF1Q92541 Z82188.1-201ENST00000436709 154 ntBASIC3.45□□□□□ -1.86
RTF1Q92541 AC009296.1-201ENST00000443146 155 ntBASIC3.45□□□□□ -1.86
RTF1Q92541 RPL30P1-201ENST00000488676 339 ntBASIC3.45□□□□□ -1.86
RTF1Q92541 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.45□□□□□ -1.86
RTF1Q92541 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.45□□□□□ -1.86
RTF1Q92541 AC131281.1-201ENST00000522984 164 ntBASIC3.45□□□□□ -1.86
RTF1Q92541 AC010928.2-201ENST00000588017 287 ntBASIC3.45□□□□□ -1.86
RTF1Q92541 RPS29P30-201ENST00000600975 111 ntBASIC3.45□□□□□ -1.86
RTF1Q92541 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.45□□□□□ -1.86
RTF1Q92541 MIR6817-201ENST00000615588 66 ntBASIC3.45□□□□□ -1.86
RTF1Q92541 U4.1-201ENST00000620349 87 ntBASIC3.45□□□□□ -1.86
RTF1Q92541 AC007792.1-201ENST00000623023 402 ntBASIC3.45□□□□□ -1.86
RTF1Q92541 IGHVIII-44-202ENST00000636235 289 ntBASIC3.45□□□□□ -1.86
RTF1Q92541 AP000560.1-201ENST00000624150 1937 ntBASIC3.44□□□□□ -1.86
RTF1Q92541 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.44□□□□□ -1.86
RTF1Q92541 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
RTF1Q92541 RNU5B-2P-201ENST00000363036 113 ntBASIC3.44□□□□□ -1.86
RTF1Q92541 SET-203ENST00000372688 801 ntTSL 2 BASIC3.44□□□□□ -1.86
RTF1Q92541 SNORA29-201ENST00000384183 140 ntBASIC3.44□□□□□ -1.86
RTF1Q92541 RNU6-17P-201ENST00000384245 107 ntBASIC3.44□□□□□ -1.86
RTF1Q92541 RNU6-18P-201ENST00000384527 107 ntBASIC3.44□□□□□ -1.86
RTF1Q92541 RNU6-750P-201ENST00000390946 107 ntBASIC3.44□□□□□ -1.86
RTF1Q92541 AC114482.1-201ENST00000418010 247 ntBASIC3.44□□□□□ -1.86
RTF1Q92541 AC104332.2-201ENST00000429959 156 ntBASIC3.44□□□□□ -1.86
RTF1Q92541 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.44□□□□□ -1.86
RTF1Q92541 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.44□□□□□ -1.86
RTF1Q92541 AC107626.1-201ENST00000471084 183 ntBASIC3.44□□□□□ -1.86
RTF1Q92541 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.44□□□□□ -1.86
RTF1Q92541 ANXA2P1-201ENST00000505539 926 ntBASIC3.44□□□□□ -1.86
RTF1Q92541 RNA5SP282-201ENST00000516355 108 ntBASIC3.44□□□□□ -1.86
RTF1Q92541 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.44□□□□□ -1.86
RTF1Q92541 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.44□□□□□ -1.86
RTF1Q92541 HSPE1P4-201ENST00000550617 308 ntBASIC3.44□□□□□ -1.86
RTF1Q92541 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.44□□□□□ -1.86
RTF1Q92541 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.44□□□□□ -1.86
RTF1Q92541 AC137590.2-201ENST00000619709 240 ntBASIC3.44□□□□□ -1.86
RTF1Q92541 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.44□□□□□ -1.86
RTF1Q92541 AL161431.1-201ENST00000618966 4205 ntBASIC3.44□□□□□ -1.86
RTF1Q92541 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RTF1Q92541 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RTF1Q92541 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RTF1Q92541 AC010889.1-201ENST00000566193 2666 ntBASIC3.44□□□□□ -1.86
RTF1Q92541 AC002543.1-201ENST00000299783 1954 ntBASIC3.43□□□□□ -1.86
RTF1Q92541 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RTF1Q92541 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
RTF1Q92541 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.43□□□□□ -1.86
RTF1Q92541 AC092268.1-201ENST00000342691 405 ntBASIC3.43□□□□□ -1.86
RTF1Q92541 Y_RNA.401-201ENST00000383965 117 ntBASIC3.43□□□□□ -1.86
RTF1Q92541 SNORA51.11-201ENST00000384442 131 ntBASIC3.43□□□□□ -1.86
RTF1Q92541 RNU2-49P-201ENST00000410666 184 ntBASIC3.43□□□□□ -1.86
RTF1Q92541 RNA5SP344-201ENST00000411081 104 ntBASIC3.43□□□□□ -1.86
RTF1Q92541 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.43□□□□□ -1.86
RTF1Q92541 AL365496.1-201ENST00000426885 215 ntBASIC3.43□□□□□ -1.86
RTF1Q92541 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.43□□□□□ -1.86
RTF1Q92541 RPL39P29-201ENST00000447779 157 ntBASIC3.43□□□□□ -1.86
RTF1Q92541 AL441985.1-201ENST00000457727 251 ntBASIC3.43□□□□□ -1.86
RTF1Q92541 AF186996.7-201ENST00000492781 209 ntBASIC3.43□□□□□ -1.86
RTF1Q92541 AC109329.1-201ENST00000518744 317 ntBASIC3.43□□□□□ -1.86
RTF1Q92541 AL161670.1-201ENST00000554348 137 ntBASIC3.43□□□□□ -1.86
RTF1Q92541 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.43□□□□□ -1.86
RTF1Q92541 AC025281.1-201ENST00000567026 265 ntBASIC3.43□□□□□ -1.86
RTF1Q92541 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.43□□□□□ -1.86
RTF1Q92541 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.43□□□□□ -1.86
RTF1Q92541 AL390123.1-201ENST00000603216 237 ntBASIC3.43□□□□□ -1.86
RTF1Q92541 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms