Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.22□□□□□ -2.05
LIMK1P53667 AC100830.2-201ENST00000581636 240 ntBASIC2.22□□□□□ -2.05
LIMK1P53667 AL109918.3-201ENST00000603072 338 ntBASIC2.22□□□□□ -2.05
LIMK1P53667 snoU13.31-201ENST00000607291 104 ntBASIC2.22□□□□□ -2.05
LIMK1P53667 AC068944.2-201ENST00000610373 403 ntBASIC2.22□□□□□ -2.05
LIMK1P53667 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
LIMK1P53667 AP000560.1-201ENST00000624150 1937 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
LIMK1P53667 MIR337-201ENST00000362281 93 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 RNU6-790P-201ENST00000384479 105 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 RNA5SP213-201ENST00000391031 106 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 MIR1277-201ENST00000408536 78 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 RN7SKP61-201ENST00000410642 295 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.21□□□□□ -2.06
LIMK1P53667 AL133396.1-201ENST00000432048 687 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 MTND1P4-201ENST00000435196 415 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 MTCO1P29-201ENST00000496868 288 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.21□□□□□ -2.06
LIMK1P53667 AC096745.1-201ENST00000509945 370 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 AC091874.1-201ENST00000511402 339 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 AC011352.1-201ENST00000512300 793 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.21□□□□□ -2.06
LIMK1P53667 RNA5SP445-201ENST00000515889 115 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 SNORA31.16-201ENST00000516773 139 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 RNU6-667P-201ENST00000517186 102 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.21□□□□□ -2.06
LIMK1P53667 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.21□□□□□ -2.06
LIMK1P53667 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.21□□□□□ -2.06
LIMK1P53667 AL096840.1-201ENST00000603287 93 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 AC018889.1-201ENST00000605372 397 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 AC104458.1-201ENST00000608243 463 ntBASIC2.21□□□□□ -2.06
LIMK1P53667 ZNF702P-202ENST00000434269 1966 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.2□□□□□ -2.06
LIMK1P53667 MIR1294-201ENST00000408503 142 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 SNORA11.4-201ENST00000408823 129 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 RNA5SP118-201ENST00000410385 109 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 Y_RNA.619-201ENST00000410951 90 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 RNU6-325P-201ENST00000411132 105 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 AL030996.1-201ENST00000411430 235 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.2□□□□□ -2.06
LIMK1P53667 ZNF885P-201ENST00000420174 1098 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 HMGN2P38-201ENST00000423806 265 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 AL353689.1-201ENST00000438895 199 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.2□□□□□ -2.06
LIMK1P53667 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.2□□□□□ -2.06
LIMK1P53667 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LIMK1P53667 AC090255.1-201ENST00000495779 349 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 MTCYBP18-201ENST00000501056 747 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.2□□□□□ -2.06
LIMK1P53667 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.2□□□□□ -2.06
LIMK1P53667 RNU6-273P-201ENST00000516937 96 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 AC034114.1-201ENST00000520293 285 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 SCOCP1-201ENST00000554676 349 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 AC008749.1-201ENST00000597650 306 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.2□□□□□ -2.06
LIMK1P53667 FAM157A-202ENST00000615155 405 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 AC007014.2-201ENST00000615581 479 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.2□□□□□ -2.06
LIMK1P53667 AC009033.1-201ENST00000624279 431 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 AC090617.10-201ENST00000624308 134 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 AC245060.5-201ENST00000610778 3293 ntBASIC2.2□□□□□ -2.06
LIMK1P53667 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.19□□□□□ -2.06
LIMK1P53667 RNU4-15P-201ENST00000362613 141 ntBASIC2.19□□□□□ -2.06
LIMK1P53667 Y_RNA.157-201ENST00000363638 102 ntBASIC2.19□□□□□ -2.06
LIMK1P53667 Y_RNA.355-201ENST00000365462 98 ntBASIC2.19□□□□□ -2.06
LIMK1P53667 Y_RNA.414-201ENST00000384011 101 ntBASIC2.19□□□□□ -2.06
LIMK1P53667 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.19□□□□□ -2.06
LIMK1P53667 WARS2P1-201ENST00000429678 537 ntBASIC2.19□□□□□ -2.06
LIMK1P53667 CBX3P6-201ENST00000430257 527 ntBASIC2.19□□□□□ -2.06
LIMK1P53667 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.19□□□□□ -2.06
LIMK1P53667 AC104435.1-201ENST00000483483 166 ntBASIC2.19□□□□□ -2.06
LIMK1P53667 FAM206BP-201ENST00000510179 541 ntBASIC2.19□□□□□ -2.06
LIMK1P53667 RNU6-567P-201ENST00000516746 107 ntBASIC2.19□□□□□ -2.06
LIMK1P53667 RNU6-256P-201ENST00000516747 97 ntBASIC2.19□□□□□ -2.06
LIMK1P53667 AC022616.8-201ENST00000533569 253 ntBASIC2.19□□□□□ -2.06
LIMK1P53667 AC021231.3-201ENST00000558497 370 ntBASIC2.19□□□□□ -2.06
LIMK1P53667 AC109446.1-201ENST00000566172 220 ntBASIC2.19□□□□□ -2.06
LIMK1P53667 MIR6845-201ENST00000613182 61 ntBASIC2.19□□□□□ -2.06
LIMK1P53667 AC022202.1-201ENST00000613515 211 ntBASIC2.19□□□□□ -2.06
LIMK1P53667 AC005296.1-201ENST00000616145 209 ntBASIC2.19□□□□□ -2.06
LIMK1P53667 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LIMK1P53667 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.19□□□□□ -2.06
LIMK1P53667 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LIMK1P53667 Y_RNA.123-201ENST00000363338 102 ntBASIC2.18□□□□□ -2.06
LIMK1P53667 MIR221-201ENST00000385135 110 ntBASIC2.18□□□□□ -2.06
LIMK1P53667 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
LIMK1P53667 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.18□□□□□ -2.06
LIMK1P53667 EIF1AXP1-201ENST00000419267 435 ntBASIC2.18□□□□□ -2.06
LIMK1P53667 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.18□□□□□ -2.06
LIMK1P53667 RPL23AP95-201ENST00000426806 265 ntBASIC2.18□□□□□ -2.06
LIMK1P53667 AC018634.1-201ENST00000437554 401 ntBASIC2.18□□□□□ -2.06
LIMK1P53667 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.18□□□□□ -2.06
LIMK1P53667 PCMTD1P1-201ENST00000455560 355 ntBASIC2.18□□□□□ -2.06
LIMK1P53667 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.18□□□□□ -2.06
LIMK1P53667 AC018868.1-201ENST00000491307 315 ntBASIC2.18□□□□□ -2.06
LIMK1P53667 RNA5SP200-201ENST00000516360 103 ntBASIC2.18□□□□□ -2.06
LIMK1P53667 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 236.2 ms