Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RNU6-932P-201ENST00000391108 106 ntBASIC-0.18□□□□□ -2.44
TNFP01375 RPL31P35-201ENST00000431058 377 ntBASIC-0.18□□□□□ -2.44
TNFP01375 AC079776.3-201ENST00000450665 370 ntBASIC-0.18□□□□□ -2.44
TNFP01375 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.18□□□□□ -2.44
TNFP01375 AL122001.1-201ENST00000457027 370 ntBASIC-0.18□□□□□ -2.44
TNFP01375 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.18□□□□□ -2.44
TNFP01375 RNU7-136P-201ENST00000458819 69 ntBASIC-0.18□□□□□ -2.44
TNFP01375 RPS3AP17-201ENST00000472594 777 ntBASIC-0.18□□□□□ -2.44
TNFP01375 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.18□□□□□ -2.44
TNFP01375 MTCO3P42-201ENST00000509488 518 ntBASIC-0.18□□□□□ -2.44
TNFP01375 MTCO3P39-201ENST00000514812 518 ntBASIC-0.18□□□□□ -2.44
TNFP01375 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.18□□□□□ -2.44
TNFP01375 AC027419.1-201ENST00000522976 328 ntBASIC-0.18□□□□□ -2.44
TNFP01375 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.18□□□□□ -2.44
TNFP01375 MIR4293-201ENST00000584305 78 ntBASIC-0.18□□□□□ -2.44
TNFP01375 AC091135.1-201ENST00000585943 307 ntBASIC-0.18□□□□□ -2.44
TNFP01375 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.18□□□□□ -2.44
TNFP01375 AC104408.1-201ENST00000605241 170 ntBASIC-0.18□□□□□ -2.44
TNFP01375 AL353149.1-201ENST00000610667 244 ntBASIC-0.18□□□□□ -2.44
TNFP01375 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.18□□□□□ -2.44
TNFP01375 RNU6-923P-201ENST00000364753 107 ntBASIC-0.19□□□□□ -2.44
TNFP01375 SNORA4.3-201ENST00000365564 137 ntBASIC-0.19□□□□□ -2.44
TNFP01375 RNU6-793P-201ENST00000384233 104 ntBASIC-0.19□□□□□ -2.44
TNFP01375 RNU6-72P-201ENST00000384285 79 ntBASIC-0.19□□□□□ -2.44
TNFP01375 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.19□□□□□ -2.44
TNFP01375 AL603865.2-201ENST00000401679 213 ntBASIC-0.19□□□□□ -2.44
TNFP01375 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.19□□□□□ -2.44
TNFP01375 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.19□□□□□ -2.44
TNFP01375 AC002486.1-201ENST00000435098 391 ntBASIC-0.19□□□□□ -2.44
TNFP01375 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.19□□□□□ -2.44
TNFP01375 AL606517.2-201ENST00000442855 241 ntBASIC-0.19□□□□□ -2.44
TNFP01375 snoU109.2-201ENST00000459316 135 ntBASIC-0.19□□□□□ -2.44
TNFP01375 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.19□□□□□ -2.44
TNFP01375 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.19□□□□□ -2.44
TNFP01375 AC109810.1-201ENST00000534066 224 ntBASIC-0.19□□□□□ -2.44
TNFP01375 MIR4764-201ENST00000580680 88 ntBASIC-0.19□□□□□ -2.44
TNFP01375 AC131055.1-201ENST00000584626 316 ntBASIC-0.19□□□□□ -2.44
TNFP01375 AC018889.1-201ENST00000605372 397 ntBASIC-0.19□□□□□ -2.44
TNFP01375 AC104985.3-201ENST00000623479 597 ntBASIC-0.19□□□□□ -2.44
TNFP01375 AC097372.5-201ENST00000623665 376 ntBASIC-0.19□□□□□ -2.44
TNFP01375 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.2□□□□□ -2.44
TNFP01375 RNU6-514P-201ENST00000384208 107 ntBASIC-0.2□□□□□ -2.44
TNFP01375 FCF1P10-201ENST00000407590 479 ntBASIC-0.2□□□□□ -2.44
TNFP01375 AL034345.1-201ENST00000407768 123 ntBASIC-0.2□□□□□ -2.44
TNFP01375 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.2□□□□□ -2.44
TNFP01375 BX664727.1-201ENST00000416024 466 ntBASIC-0.2□□□□□ -2.44
TNFP01375 MRPS36P1-201ENST00000421291 307 ntBASIC-0.2□□□□□ -2.44
TNFP01375 AC060773.1-201ENST00000421698 310 ntBASIC-0.2□□□□□ -2.44
TNFP01375 AL365338.1-201ENST00000422282 858 ntBASIC-0.2□□□□□ -2.44
TNFP01375 MTCYBP10-201ENST00000424905 650 ntBASIC-0.2□□□□□ -2.44
TNFP01375 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.2□□□□□ -2.44
TNFP01375 AC010154.1-201ENST00000425857 269 ntBASIC-0.2□□□□□ -2.44
TNFP01375 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.2□□□□□ -2.44
TNFP01375 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.2□□□□□ -2.44
TNFP01375 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.2□□□□□ -2.44
TNFP01375 AL162725.1-201ENST00000435405 301 ntBASIC-0.2□□□□□ -2.44
TNFP01375 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.2□□□□□ -2.44
TNFP01375 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
TNFP01375 MTCO2P18-201ENST00000457151 658 ntBASIC-0.2□□□□□ -2.44
TNFP01375 AC016925.1-201ENST00000458303 298 ntBASIC-0.2□□□□□ -2.44
TNFP01375 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.2□□□□□ -2.44
TNFP01375 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.2□□□□□ -2.44
TNFP01375 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.2□□□□□ -2.44
TNFP01375 RNA5SP227-201ENST00000516184 113 ntBASIC-0.2□□□□□ -2.44
TNFP01375 AC023632.1-201ENST00000518463 375 ntBASIC-0.2□□□□□ -2.44
TNFP01375 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
TNFP01375 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.2□□□□□ -2.44
TNFP01375 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.2□□□□□ -2.44
TNFP01375 AL136363.2-201ENST00000604173 851 ntBASIC-0.2□□□□□ -2.44
TNFP01375 AC005332.6-201ENST00000613178 446 ntBASIC-0.2□□□□□ -2.44
TNFP01375 AC011155.2-201ENST00000623202 216 ntBASIC-0.2□□□□□ -2.44
TNFP01375 AL603839.4-201ENST00000624658 1005 ntBASIC-0.2□□□□□ -2.44
TNFP01375 MIR338-201ENST00000636369 67 ntBASIC-0.2□□□□□ -2.44
TNFP01375 SNORA72.2-201ENST00000365028 127 ntBASIC-0.21□□□□□ -2.44
TNFP01375 MIR518A1-201ENST00000385068 85 ntBASIC-0.21□□□□□ -2.44
TNFP01375 RNA5SP109-201ENST00000391010 116 ntBASIC-0.21□□□□□ -2.44
TNFP01375 RNU6-817P-201ENST00000391083 104 ntBASIC-0.21□□□□□ -2.44
TNFP01375 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.21□□□□□ -2.44
TNFP01375 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.21□□□□□ -2.44
TNFP01375 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.21□□□□□ -2.44
TNFP01375 MTCO1P3-201ENST00000429327 192 ntBASIC-0.21□□□□□ -2.44
TNFP01375 MTND4LP14-201ENST00000429447 288 ntBASIC-0.21□□□□□ -2.44
TNFP01375 AL591704.1-201ENST00000432574 275 ntBASIC-0.21□□□□□ -2.44
TNFP01375 AC104332.1-201ENST00000440471 797 ntBASIC-0.21□□□□□ -2.44
TNFP01375 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.21□□□□□ -2.44
TNFP01375 MTND1P31-201ENST00000449206 961 ntBASIC-0.21□□□□□ -2.44
TNFP01375 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.21□□□□□ -2.44
TNFP01375 AC245047.8-201ENST00000456455 284 ntBASIC-0.21□□□□□ -2.44
TNFP01375 RNU1-86P-201ENST00000516108 154 ntBASIC-0.21□□□□□ -2.44
TNFP01375 RNU1-107P-201ENST00000516617 154 ntBASIC-0.21□□□□□ -2.44
TNFP01375 RNU6-856P-201ENST00000516959 98 ntBASIC-0.21□□□□□ -2.44
TNFP01375 SUB1P2-201ENST00000556401 297 ntBASIC-0.21□□□□□ -2.44
TNFP01375 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.21□□□□□ -2.44
TNFP01375 AL157871.3-201ENST00000557231 293 ntBASIC-0.21□□□□□ -2.44
TNFP01375 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.21□□□□□ -2.44
TNFP01375 AC138749.5-201ENST00000611461 208 ntBASIC-0.21□□□□□ -2.44
TNFP01375 uc_338.6-201ENST00000613544 171 ntBASIC-0.21□□□□□ -2.44
TNFP01375 Pinc.1-201ENST00000616452 154 ntBASIC-0.21□□□□□ -2.44
TNFP01375 AC136475.10-201ENST00000620253 385 ntBASIC-0.21□□□□□ -2.44
TNFP01375 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms