Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PDGFBP01127 ZNF355P-201ENST00000427301 3216 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
PDGFBP01127 RNU6-522P-201ENST00000364497 107 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 SNORA51.11-201ENST00000384442 131 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 SNORA46.1-201ENST00000391069 153 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 EIF4E2P1-201ENST00000393781 255 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 AC027124.2-201ENST00000428249 105 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 MTND3P9-201ENST00000429526 346 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 AL353689.1-201ENST00000438895 199 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.03□□□□□ -2.08
PDGFBP01127 AC007969.2-201ENST00000441891 191 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.03□□□□□ -2.08
PDGFBP01127 AMD1P1-201ENST00000457220 922 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.03□□□□□ -2.08
PDGFBP01127 AC091885.1-201ENST00000506658 268 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 AC092436.3-201ENST00000511788 257 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 SNORA25.15-201ENST00000516487 89 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 AC109479.2-201ENST00000517842 174 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 MTND4LP26-201ENST00000518144 282 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 AC087854.1-201ENST00000519706 414 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 AC091135.1-201ENST00000585943 307 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 BNIP3P25-201ENST00000596023 559 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 AC009314.1-201ENST00000603871 304 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 BX248123.2-201ENST00000606318 124 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 AL627230.6-201ENST00000611129 280 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 AC022202.1-201ENST00000613515 211 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
PDGFBP01127 AC091932.3-201ENST00000624223 323 ntBASIC2.03□□□□□ -2.08
PDGFBP01127 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
PDGFBP01127 Y_RNA.167-201ENST00000363735 109 ntBASIC2.02□□□□□ -2.09
PDGFBP01127 RNU6-82P-201ENST00000363970 107 ntBASIC2.02□□□□□ -2.09
PDGFBP01127 RNU6-1106P-201ENST00000390845 107 ntBASIC2.02□□□□□ -2.09
PDGFBP01127 SNORA48.3-201ENST00000391081 134 ntBASIC2.02□□□□□ -2.09
PDGFBP01127 AL627390.1-201ENST00000396055 340 ntBASIC2.02□□□□□ -2.09
PDGFBP01127 RNA5SP450-201ENST00000411206 102 ntBASIC2.02□□□□□ -2.09
PDGFBP01127 AL117339.3-201ENST00000418733 162 ntBASIC2.02□□□□□ -2.09
PDGFBP01127 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.02□□□□□ -2.09
PDGFBP01127 EIF1P1-201ENST00000421436 341 ntBASIC2.02□□□□□ -2.09
PDGFBP01127 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.02□□□□□ -2.09
PDGFBP01127 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.02□□□□□ -2.09
PDGFBP01127 RPL30P1-201ENST00000488676 339 ntBASIC2.02□□□□□ -2.09
PDGFBP01127 AC069439.1-201ENST00000494739 167 ntBASIC2.02□□□□□ -2.09
PDGFBP01127 RNU6-1069P-201ENST00000516612 133 ntBASIC2.02□□□□□ -2.09
PDGFBP01127 AC115990.1-201ENST00000526957 301 ntBASIC2.02□□□□□ -2.09
PDGFBP01127 AC087241.2-201ENST00000535801 324 ntBASIC2.02□□□□□ -2.09
PDGFBP01127 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.02□□□□□ -2.09
PDGFBP01127 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.02□□□□□ -2.09
PDGFBP01127 SUB1P3-201ENST00000564581 315 ntBASIC2.02□□□□□ -2.09
PDGFBP01127 AC104458.1-201ENST00000608243 463 ntBASIC2.02□□□□□ -2.09
PDGFBP01127 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
PDGFBP01127 AL159153.1-201ENST00000619688 317 ntBASIC2.02□□□□□ -2.09
PDGFBP01127 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.02□□□□□ -2.09
PDGFBP01127 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.02□□□□□ -2.09
PDGFBP01127 ZNF702P-202ENST00000434269 1966 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 AC005336.3-201ENST00000623833 2679 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 RNU6-1317P-201ENST00000364582 104 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 Y_RNA.504-201ENST00000384481 104 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 RNA5SP465-201ENST00000391195 109 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 SRIP3-201ENST00000413200 219 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 AL158823.1-201ENST00000418441 478 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 ARL5AP1-201ENST00000418991 388 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 MTND2P29-201ENST00000438595 412 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 AL031659.1-201ENST00000447075 539 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.01□□□□□ -2.09
PDGFBP01127 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.01□□□□□ -2.09
PDGFBP01127 AL353752.1-201ENST00000454946 260 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 PMCHL2-203ENST00000457791 237 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 AC007547.1-201ENST00000462177 490 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 HMGN2P26-201ENST00000463169 339 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 RPL9P9-202ENST00000466501 579 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.01□□□□□ -2.09
PDGFBP01127 AC091874.1-201ENST00000511402 339 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.01□□□□□ -2.09
PDGFBP01127 RNU6-965P-201ENST00000516721 96 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.01□□□□□ -2.09
PDGFBP01127 HSPE1P4-201ENST00000550617 308 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 AC007375.1-201ENST00000554513 578 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 SNORA4-201ENST00000584302 138 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 AC068944.2-201ENST00000610373 403 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 AC093913.1-201ENST00000614178 329 ntBASIC2.01□□□□□ -2.09
PDGFBP01127 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2□□□□□ -2.09
PDGFBP01127 RNU6-743P-201ENST00000364151 106 ntBASIC2□□□□□ -2.09
PDGFBP01127 RNU6-214P-201ENST00000384130 107 ntBASIC2□□□□□ -2.09
PDGFBP01127 RNU6-43P-201ENST00000384302 107 ntBASIC2□□□□□ -2.09
PDGFBP01127 RNU6-1222P-201ENST00000384615 107 ntBASIC2□□□□□ -2.09
PDGFBP01127 AL590632.1-201ENST00000424289 371 ntBASIC2□□□□□ -2.09
PDGFBP01127 CBX3P6-201ENST00000430257 527 ntBASIC2□□□□□ -2.09
PDGFBP01127 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2□□□□□ -2.09
PDGFBP01127 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2□□□□□ -2.09
PDGFBP01127 MRPS17P9-201ENST00000511924 393 ntBASIC2□□□□□ -2.09
PDGFBP01127 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2□□□□□ -2.09
PDGFBP01127 Y_RNA.670-201ENST00000516255 105 ntBASIC2□□□□□ -2.09
PDGFBP01127 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2□□□□□ -2.09
PDGFBP01127 AC026371.1-201ENST00000551867 419 ntBASIC2□□□□□ -2.09
PDGFBP01127 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2□□□□□ -2.09
PDGFBP01127 MIR3683-201ENST00000580847 82 ntBASIC2□□□□□ -2.09
PDGFBP01127 AL096840.1-201ENST00000603287 93 ntBASIC2□□□□□ -2.09
PDGFBP01127 AC005296.1-201ENST00000616145 209 ntBASIC2□□□□□ -2.09
PDGFBP01127 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms