Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KLHDC3Q9BQ90 SEPT14P4-201ENST00000513445 186 ntBASIC1.63□□□□□ -2.15
KLHDC3Q9BQ90 RNU6-567P-201ENST00000516746 107 ntBASIC1.63□□□□□ -2.15
KLHDC3Q9BQ90 SNORD60.2-201ENST00000516883 86 ntBASIC1.63□□□□□ -2.15
KLHDC3Q9BQ90 RNU6-323P-201ENST00000521915 107 ntBASIC1.63□□□□□ -2.15
KLHDC3Q9BQ90 FO082796.1-201ENST00000523795 183 ntBASIC1.63□□□□□ -2.15
KLHDC3Q9BQ90 AP005597.4-201ENST00000526762 229 ntBASIC1.63□□□□□ -2.15
KLHDC3Q9BQ90 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.63□□□□□ -2.15
KLHDC3Q9BQ90 AC021231.3-201ENST00000558497 370 ntBASIC1.63□□□□□ -2.15
KLHDC3Q9BQ90 HMGB1P33-201ENST00000563485 527 ntBASIC1.63□□□□□ -2.15
KLHDC3Q9BQ90 MIR4419B-201ENST00000577260 68 ntBASIC1.63□□□□□ -2.15
KLHDC3Q9BQ90 AC097065.2-201ENST00000608159 533 ntBASIC1.63□□□□□ -2.15
KLHDC3Q9BQ90 MIR1248-201ENST00000629190 106 ntBASIC1.63□□□□□ -2.15
KLHDC3Q9BQ90 AC068137.3-201ENST00000639191 341 ntBASIC1.63□□□□□ -2.15
KLHDC3Q9BQ90 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
KLHDC3Q9BQ90 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
KLHDC3Q9BQ90 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
KLHDC3Q9BQ90 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 WWP1P1-201ENST00000466609 2769 ntBASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 Y_RNA.99-201ENST00000363138 105 ntBASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 RNU6-743P-201ENST00000364151 106 ntBASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 Y_RNA.231-201ENST00000364358 102 ntBASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 AL357139.1-201ENST00000407792 426 ntBASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 RNA5SP201-201ENST00000410316 124 ntBASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 AL645568.3-201ENST00000433683 316 ntBASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 MTND2P29-201ENST00000438595 412 ntBASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 HSBP1P1-201ENST00000555205 166 ntBASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 MIR3923-201ENST00000579521 83 ntBASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 MIR5692C1-201ENST00000585309 91 ntBASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 AL162413.1-201ENST00000603198 110 ntBASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 AC116312.1-201ENST00000606841 314 ntBASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 AL357078.3-201ENST00000607528 618 ntBASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 DUXAP9-208ENST00000622815 614 ntBASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KLHDC3Q9BQ90 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 SNORD115-3-201ENST00000363100 82 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 MIR583-201ENST00000384846 75 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 SNORA12-201ENST00000391162 147 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 EIF4E2P1-201ENST00000393781 255 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 AL033519.2-201ENST00000403958 392 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 MIR1283-2-201ENST00000408621 87 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 AC244636.1-201ENST00000421152 228 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 AC096920.1-201ENST00000423991 241 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 MTND3P21-201ENST00000433774 331 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 AL359672.1-201ENST00000442302 409 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 AC008628.2-201ENST00000502605 298 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 AC093259.1-201ENST00000509755 300 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 AC091874.1-201ENST00000511402 339 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 RNU6-1281P-201ENST00000516223 105 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 AC025423.5-201ENST00000550230 219 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 AC078795.3-201ENST00000602913 472 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 AC068944.2-201ENST00000610373 403 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 AC084768.2-201ENST00000622736 221 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 SNORA43.4-201ENST00000629559 138 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 AC121333.1-201ENST00000567488 2709 ntBASIC1.61□□□□□ -2.15
KLHDC3Q9BQ90 MTND4P23-201ENST00000447723 1363 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 OR4G1P-203ENST00000641984 1631 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 RNA5SP276-201ENST00000362580 94 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 Y_RNA.167-201ENST00000363735 109 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 RNU6-1329P-201ENST00000365664 107 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 RNU6-26P-201ENST00000383985 107 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 Y_RNA.504-201ENST00000384481 104 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 Y_RNA.517-201ENST00000384551 106 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 AC019129.1-201ENST00000403786 261 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 U8.21-201ENST00000459536 136 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 AC027575.1-201ENST00000481064 460 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 RN7SL274P-201ENST00000492268 272 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 RNU6-991P-201ENST00000516168 107 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 RNU6-295P-201ENST00000516901 104 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 RNU6-612P-201ENST00000516909 102 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 AC016256.1-201ENST00000547971 354 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 AC245505.1-201ENST00000556398 224 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 CYP4A27P-201ENST00000567218 190 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 AL158827.2-201ENST00000602494 330 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 AL078605.1-201ENST00000603529 500 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 Z98751.3-201ENST00000604447 521 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 AC092954.2-201ENST00000609103 430 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 AL121757.2-201ENST00000611223 313 ntBASIC1.6□□□□□ -2.15
KLHDC3Q9BQ90 AC015540.1-201ENST00000615828 501 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms