Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 Y_RNA.157-201ENST00000363638 102 ntBASIC2.54□□□□□ -2
DDX58O95786 RNU6-1317P-201ENST00000364582 104 ntBASIC2.54□□□□□ -2
DDX58O95786 RNU6-933P-201ENST00000384424 107 ntBASIC2.54□□□□□ -2
DDX58O95786 Y_RNA.504-201ENST00000384481 104 ntBASIC2.54□□□□□ -2
DDX58O95786 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.54□□□□□ -2
DDX58O95786 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.54□□□□□ -2
DDX58O95786 MTND3P9-201ENST00000429526 346 ntBASIC2.54□□□□□ -2
DDX58O95786 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.54□□□□□ -2
DDX58O95786 MTATP6P13-201ENST00000438531 667 ntBASIC2.54□□□□□ -2
DDX58O95786 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.54□□□□□ -2
DDX58O95786 snoU13.23-201ENST00000458863 104 ntBASIC2.54□□□□□ -2
DDX58O95786 TRBVA-201ENST00000498804 316 ntBASIC2.54□□□□□ -2
DDX58O95786 RNU6-965P-201ENST00000516721 96 ntBASIC2.54□□□□□ -2
DDX58O95786 RNU7-193P-201ENST00000516723 65 ntBASIC2.54□□□□□ -2
DDX58O95786 AP003033.1-201ENST00000527244 415 ntBASIC2.54□□□□□ -2
DDX58O95786 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.54□□□□□ -2
DDX58O95786 AC009127.3-201ENST00000570531 403 ntBASIC2.54□□□□□ -2
DDX58O95786 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.54□□□□□ -2
DDX58O95786 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.54□□□□□ -2
DDX58O95786 AC009033.1-201ENST00000624279 431 ntBASIC2.54□□□□□ -2
DDX58O95786 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.54□□□□□ -2
DDX58O95786 AP000560.1-201ENST00000624150 1937 ntBASIC2.54□□□□□ -2
DDX58O95786 AC009541.1-201ENST00000438279 2662 ntBASIC2.54□□□□□ -2
DDX58O95786 AC005336.3-201ENST00000623833 2679 ntBASIC2.54□□□□□ -2
DDX58O95786 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
DDX58O95786 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
DDX58O95786 RNU6-944P-201ENST00000364023 107 ntBASIC2.53□□□□□ -2
DDX58O95786 RNU6-743P-201ENST00000364151 106 ntBASIC2.53□□□□□ -2
DDX58O95786 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.53□□□□□ -2
DDX58O95786 RNU6-128P-201ENST00000383976 107 ntBASIC2.53□□□□□ -2
DDX58O95786 Y_RNA.414-201ENST00000384011 101 ntBASIC2.53□□□□□ -2
DDX58O95786 ZNF885P-201ENST00000420174 1098 ntBASIC2.53□□□□□ -2
DDX58O95786 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.53□□□□□ -2
DDX58O95786 GPM6BP3-201ENST00000442797 145 ntBASIC2.53□□□□□ -2
DDX58O95786 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.53□□□□□ -2
DDX58O95786 AC096745.1-201ENST00000509945 370 ntBASIC2.53□□□□□ -2
DDX58O95786 AC025465.4-201ENST00000513422 638 ntBASIC2.53□□□□□ -2
DDX58O95786 SNORA31.11-201ENST00000516528 139 ntBASIC2.53□□□□□ -2
DDX58O95786 RNU6-256P-201ENST00000516747 97 ntBASIC2.53□□□□□ -2
DDX58O95786 RNU6-1314P-201ENST00000517139 104 ntBASIC2.53□□□□□ -2
DDX58O95786 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.53□□□□□ -2
DDX58O95786 AC022616.8-201ENST00000533569 253 ntBASIC2.53□□□□□ -2
DDX58O95786 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.53□□□□□ -2
DDX58O95786 MYL12BP1-201ENST00000569826 507 ntBASIC2.53□□□□□ -2
DDX58O95786 AC100830.2-201ENST00000581636 240 ntBASIC2.53□□□□□ -2
DDX58O95786 AP003465.2-201ENST00000602571 373 ntBASIC2.53□□□□□ -2
DDX58O95786 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
DDX58O95786 AC068944.2-201ENST00000610373 403 ntBASIC2.53□□□□□ -2
DDX58O95786 AC012640.5-201ENST00000623897 319 ntBASIC2.53□□□□□ -2
DDX58O95786 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
DDX58O95786 AC092268.1-201ENST00000342691 405 ntBASIC2.52□□□□□ -2.01
DDX58O95786 Y_RNA.86-201ENST00000363020 111 ntBASIC2.52□□□□□ -2.01
DDX58O95786 RNU6-142P-201ENST00000384019 107 ntBASIC2.52□□□□□ -2.01
DDX58O95786 MIR521-1-201ENST00000384902 87 ntBASIC2.52□□□□□ -2.01
DDX58O95786 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
DDX58O95786 SNORD23.1-201ENST00000408212 104 ntBASIC2.52□□□□□ -2.01
DDX58O95786 AP000275.1-201ENST00000411943 390 ntBASIC2.52□□□□□ -2.01
DDX58O95786 CBX3P6-201ENST00000430257 527 ntBASIC2.52□□□□□ -2.01
DDX58O95786 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.52□□□□□ -2.01
DDX58O95786 RPL23AP42-201ENST00000471152 471 ntBASIC2.52□□□□□ -2.01
DDX58O95786 AC018868.1-201ENST00000491307 315 ntBASIC2.52□□□□□ -2.01
DDX58O95786 AC145146.1-201ENST00000496370 254 ntBASIC2.52□□□□□ -2.01
DDX58O95786 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.52□□□□□ -2.01
DDX58O95786 SNORA59B-202ENST00000578183 701 ntBASIC2.52□□□□□ -2.01
DDX58O95786 MIR4769-201ENST00000584126 77 ntBASIC2.52□□□□□ -2.01
DDX58O95786 SNRPGP17-201ENST00000603780 214 ntBASIC2.52□□□□□ -2.01
DDX58O95786 AC018889.1-201ENST00000605372 397 ntBASIC2.52□□□□□ -2.01
DDX58O95786 AC022202.1-201ENST00000613515 211 ntBASIC2.52□□□□□ -2.01
DDX58O95786 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.52□□□□□ -2.01
DDX58O95786 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
DDX58O95786 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.51□□□□□ -2.01
DDX58O95786 SNORD32A-201ENST00000364805 84 ntBASIC2.51□□□□□ -2.01
DDX58O95786 RNU6-790P-201ENST00000384479 105 ntBASIC2.51□□□□□ -2.01
DDX58O95786 MIR1294-201ENST00000408503 142 ntBASIC2.51□□□□□ -2.01
DDX58O95786 RN7SKP61-201ENST00000410642 295 ntBASIC2.51□□□□□ -2.01
DDX58O95786 RNU6-325P-201ENST00000411132 105 ntBASIC2.51□□□□□ -2.01
DDX58O95786 AL591806.2-201ENST00000433122 173 ntBASIC2.51□□□□□ -2.01
DDX58O95786 MTND4LP16-201ENST00000440828 295 ntBASIC2.51□□□□□ -2.01
DDX58O95786 AL137159.1-201ENST00000452808 512 ntBASIC2.51□□□□□ -2.01
DDX58O95786 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.51□□□□□ -2.01
DDX58O95786 AC025033.1-201ENST00000463883 194 ntBASIC2.51□□□□□ -2.01
DDX58O95786 RPS29P25-201ENST00000481709 171 ntBASIC2.51□□□□□ -2.01
DDX58O95786 MTCO1P29-201ENST00000496868 288 ntBASIC2.51□□□□□ -2.01
DDX58O95786 AC114801.2-201ENST00000503825 781 ntBASIC2.51□□□□□ -2.01
DDX58O95786 AC091874.1-201ENST00000511402 339 ntBASIC2.51□□□□□ -2.01
DDX58O95786 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.51□□□□□ -2.01
DDX58O95786 AC107953.1-201ENST00000522216 297 ntBASIC2.51□□□□□ -2.01
DDX58O95786 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.51□□□□□ -2.01
DDX58O95786 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
DDX58O95786 MTND4P5-201ENST00000435821 1374 ntBASIC2.5□□□□□ -2.01
DDX58O95786 RNU6-227P-201ENST00000362865 103 ntBASIC2.5□□□□□ -2.01
DDX58O95786 SNORD115-3-201ENST00000363100 82 ntBASIC2.5□□□□□ -2.01
DDX58O95786 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
DDX58O95786 AL030996.1-201ENST00000411430 235 ntBASIC2.5□□□□□ -2.01
DDX58O95786 AL513185.2-201ENST00000425543 193 ntBASIC2.5□□□□□ -2.01
DDX58O95786 MTCO3P18-201ENST00000440206 761 ntBASIC2.5□□□□□ -2.01
DDX58O95786 AC245102.2-201ENST00000448956 180 ntBASIC2.5□□□□□ -2.01
DDX58O95786 AC107032.1-201ENST00000485945 480 ntBASIC2.5□□□□□ -2.01
DDX58O95786 AC104564.1-201ENST00000493028 407 ntBASIC2.5□□□□□ -2.01
DDX58O95786 AC069439.1-201ENST00000494739 167 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms