Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.19□□□□□ -2.38
CDK5RAP2Q96SN8 RNU6-551P-201ENST00000516661 103 ntBASIC0.19□□□□□ -2.38
CDK5RAP2Q96SN8 AC023632.1-201ENST00000518463 375 ntBASIC0.19□□□□□ -2.38
CDK5RAP2Q96SN8 AC023050.2-201ENST00000544968 387 ntBASIC0.19□□□□□ -2.38
CDK5RAP2Q96SN8 DPPA3P3-201ENST00000603842 430 ntBASIC0.19□□□□□ -2.38
CDK5RAP2Q96SN8 AC090625.1-201ENST00000357130 210 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 SNORA4.3-201ENST00000365564 137 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 AL606489.2-201ENST00000433886 234 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 AC002486.1-201ENST00000435098 391 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 AC233266.1-201ENST00000454518 96 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 RNU7-90P-201ENST00000459216 62 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 AC025627.3-201ENST00000582078 182 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 MIR4636-201ENST00000582271 80 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 MIR4305-201ENST00000583252 102 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 ZNF92P2-201ENST00000600543 1059 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 AL513534.2-201ENST00000603836 250 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 AL136363.2-201ENST00000604173 851 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 AC242852.1-201ENST00000612151 96 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 AC021506.2-201ENST00000612354 169 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 AC244015.1-201ENST00000622301 99 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 RNU6-1327P-201ENST00000365302 105 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 SNORA2A-201ENST00000383885 135 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 Y_RNA.518-201ENST00000384552 113 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 MIR301A-201ENST00000385261 86 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 FABP5P4-201ENST00000437203 171 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 RNU6-583P-201ENST00000516012 92 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 MTCO3P15-201ENST00000526563 574 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 ZNF971P-201ENST00000562068 1249 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 AC109446.1-201ENST00000566172 220 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 AL512347.1-201ENST00000566420 503 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 AC092325.1-201ENST00000566449 554 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 AC018889.1-201ENST00000605372 397 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 AL353765.1-201ENST00000605514 183 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 AL360219.1-201ENST00000610230 366 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 MTND4P14-201ENST00000435799 1354 ntBASIC0.18□□□□□ -2.38
CDK5RAP2Q96SN8 RNU6-744P-201ENST00000365557 107 ntBASIC0.17□□□□□ -2.38
CDK5RAP2Q96SN8 U6.112-201ENST00000384129 70 ntBASIC0.17□□□□□ -2.38
CDK5RAP2Q96SN8 RNU6-1316P-201ENST00000384242 108 ntBASIC0.17□□□□□ -2.38
CDK5RAP2Q96SN8 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.17□□□□□ -2.38
CDK5RAP2Q96SN8 MTCO3P43-201ENST00000440974 771 ntBASIC0.17□□□□□ -2.38
CDK5RAP2Q96SN8 AC073910.1-201ENST00000445047 438 ntBASIC0.17□□□□□ -2.38
CDK5RAP2Q96SN8 RPS26P48-201ENST00000491713 339 ntBASIC0.17□□□□□ -2.38
CDK5RAP2Q96SN8 AL022154.1-201ENST00000604698 785 ntBASIC0.17□□□□□ -2.38
CDK5RAP2Q96SN8 AL355816.2-201ENST00000610049 647 ntBASIC0.17□□□□□ -2.38
CDK5RAP2Q96SN8 AC008147.4-201ENST00000617570 1204 ntBASIC0.17□□□□□ -2.38
CDK5RAP2Q96SN8 AC112204.3-201ENST00000623822 332 ntBASIC0.17□□□□□ -2.38
CDK5RAP2Q96SN8 AC068647.2-201ENST00000637380 353 ntBASIC0.17□□□□□ -2.38
CDK5RAP2Q96SN8 MIR412-201ENST00000362142 91 ntBASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 RNU6-72P-201ENST00000384285 79 ntBASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 RNU6-883P-201ENST00000384597 107 ntBASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 MTCYBP1-201ENST00000454315 1119 ntBASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 AC093899.1-201ENST00000457984 376 ntBASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 MTND1P36-201ENST00000522384 936 ntBASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 AC126177.8-201ENST00000618339 1015 ntBASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 AC023934.1-201ENST00000574529 2389 ntBASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 RNU5B-1-201ENST00000363286 116 ntBASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 SNORA80D-201ENST00000384488 135 ntBASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 AC114878.1-201ENST00000441166 358 ntBASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 RNA5SP134-201ENST00000516492 96 ntBASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 RNU4-77P-201ENST00000516692 156 ntBASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 AC100812.1-201ENST00000607622 580 ntBASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 AC009509.4-201ENST00000619202 509 ntBASIC0.16□□□□□ -2.38
CDK5RAP2Q96SN8 Y_RNA.60-201ENST00000362831 98 ntBASIC0.15□□□□□ -2.39
CDK5RAP2Q96SN8 RNU6-793P-201ENST00000384233 104 ntBASIC0.15□□□□□ -2.39
CDK5RAP2Q96SN8 MIR19A-201ENST00000384878 82 ntBASIC0.15□□□□□ -2.39
CDK5RAP2Q96SN8 SNORD65.1-201ENST00000390889 71 ntBASIC0.15□□□□□ -2.39
CDK5RAP2Q96SN8 RAP1BP3-201ENST00000407180 549 ntBASIC0.15□□□□□ -2.39
CDK5RAP2Q96SN8 CETN4P-201ENST00000432407 469 ntBASIC0.15□□□□□ -2.39
CDK5RAP2Q96SN8 AL031313.1-201ENST00000448435 256 ntBASIC0.15□□□□□ -2.39
CDK5RAP2Q96SN8 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.15□□□□□ -2.39
CDK5RAP2Q96SN8 AC122134.1-202ENST00000569111 1201 ntBASIC0.15□□□□□ -2.39
CDK5RAP2Q96SN8 AC069545.1-201ENST00000605671 358 ntBASIC0.15□□□□□ -2.39
CDK5RAP2Q96SN8 RNU6-945P-201ENST00000383947 107 ntBASIC0.14□□□□□ -2.39
CDK5RAP2Q96SN8 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.14□□□□□ -2.39
CDK5RAP2Q96SN8 RPL23AP95-201ENST00000426806 265 ntBASIC0.14□□□□□ -2.39
CDK5RAP2Q96SN8 PAXBP1P1-201ENST00000449315 447 ntBASIC0.14□□□□□ -2.39
CDK5RAP2Q96SN8 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.14□□□□□ -2.39
CDK5RAP2Q96SN8 AC026741.1-201ENST00000605892 482 ntBASIC0.14□□□□□ -2.39
CDK5RAP2Q96SN8 AL353149.1-201ENST00000610667 244 ntBASIC0.14□□□□□ -2.39
CDK5RAP2Q96SN8 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.14□□□□□ -2.39
CDK5RAP2Q96SN8 CASC19-280ENST00000642102 1351 ntBASIC0.14□□□□□ -2.39
CDK5RAP2Q96SN8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms