Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.28□□□□□ -2.04
PRPF39Q86UA1 Y_RNA.9-201ENST00000362354 101 ntBASIC2.27□□□□□ -2.05
PRPF39Q86UA1 Y_RNA.38-201ENST00000362617 102 ntBASIC2.27□□□□□ -2.05
PRPF39Q86UA1 RNU6-1159P-201ENST00000362933 107 ntBASIC2.27□□□□□ -2.05
PRPF39Q86UA1 RNU6-1090P-201ENST00000364065 94 ntBASIC2.27□□□□□ -2.05
PRPF39Q86UA1 RNU6-1317P-201ENST00000364582 104 ntBASIC2.27□□□□□ -2.05
PRPF39Q86UA1 MIR221-201ENST00000385135 110 ntBASIC2.27□□□□□ -2.05
PRPF39Q86UA1 AL357139.1-201ENST00000407792 426 ntBASIC2.27□□□□□ -2.05
PRPF39Q86UA1 RNU6-908P-201ENST00000410160 94 ntBASIC2.27□□□□□ -2.05
PRPF39Q86UA1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.27□□□□□ -2.05
PRPF39Q86UA1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.27□□□□□ -2.05
PRPF39Q86UA1 AC132942.1-201ENST00000486753 483 ntBASIC2.27□□□□□ -2.05
PRPF39Q86UA1 AC025465.4-201ENST00000513422 638 ntBASIC2.27□□□□□ -2.05
PRPF39Q86UA1 IGLV3-17-201ENST00000519099 244 ntBASIC2.27□□□□□ -2.05
PRPF39Q86UA1 MTND1P35-201ENST00000526739 508 ntBASIC2.27□□□□□ -2.05
PRPF39Q86UA1 AC016957.1-201ENST00000534895 309 ntBASIC2.27□□□□□ -2.05
PRPF39Q86UA1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.27□□□□□ -2.05
PRPF39Q86UA1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.27□□□□□ -2.05
PRPF39Q86UA1 AL158827.2-201ENST00000602494 330 ntBASIC2.27□□□□□ -2.05
PRPF39Q86UA1 MIR7843-201ENST00000622274 79 ntBASIC2.27□□□□□ -2.05
PRPF39Q86UA1 AL691447.3-201ENST00000635020 330 ntBASIC2.27□□□□□ -2.05
PRPF39Q86UA1 AC121333.1-201ENST00000567488 2709 ntBASIC2.27□□□□□ -2.05
PRPF39Q86UA1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
PRPF39Q86UA1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.26□□□□□ -2.05
PRPF39Q86UA1 U3.9-201ENST00000363823 204 ntBASIC2.26□□□□□ -2.05
PRPF39Q86UA1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
PRPF39Q86UA1 Y_RNA.402-201ENST00000383972 102 ntBASIC2.26□□□□□ -2.05
PRPF39Q86UA1 MIR1262-201ENST00000408276 93 ntBASIC2.26□□□□□ -2.05
PRPF39Q86UA1 UBE2V1P4-201ENST00000425374 344 ntBASIC2.26□□□□□ -2.05
PRPF39Q86UA1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.26□□□□□ -2.05
PRPF39Q86UA1 AMD1P1-201ENST00000457220 922 ntBASIC2.26□□□□□ -2.05
PRPF39Q86UA1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.26□□□□□ -2.05
PRPF39Q86UA1 AC093259.1-201ENST00000509755 300 ntBASIC2.26□□□□□ -2.05
PRPF39Q86UA1 RNU6-720P-201ENST00000516363 108 ntBASIC2.26□□□□□ -2.05
PRPF39Q86UA1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.26□□□□□ -2.05
PRPF39Q86UA1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.26□□□□□ -2.05
PRPF39Q86UA1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
PRPF39Q86UA1 CYP4A27P-201ENST00000567218 190 ntBASIC2.26□□□□□ -2.05
PRPF39Q86UA1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.26□□□□□ -2.05
PRPF39Q86UA1 Z98751.3-201ENST00000604447 521 ntBASIC2.26□□□□□ -2.05
PRPF39Q86UA1 AC009831.4-201ENST00000620744 325 ntBASIC2.26□□□□□ -2.05
PRPF39Q86UA1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.26□□□□□ -2.05
PRPF39Q86UA1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.26□□□□□ -2.05
PRPF39Q86UA1 Y_RNA.3-201ENST00000362331 103 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 RNY3P3-201ENST00000363816 102 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 SNORD32B-201ENST00000364460 84 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 RNU6-522P-201ENST00000364497 107 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 RNU6-26P-201ENST00000383985 107 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 SNORA36A-201ENST00000384221 132 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 SNORA26.3-201ENST00000391119 136 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 MIR208B-201ENST00000401172 77 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 MTCYBP2-201ENST00000407745 171 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 Y_RNA.615-201ENST00000410769 117 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.25□□□□□ -2.05
PRPF39Q86UA1 EIF1AXP1-201ENST00000419267 435 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.25□□□□□ -2.05
PRPF39Q86UA1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.25□□□□□ -2.05
PRPF39Q86UA1 AC092436.3-201ENST00000511788 257 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 RNA5SP490-201ENST00000517141 136 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 AP005660.1-201ENST00000522972 293 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.25□□□□□ -2.05
PRPF39Q86UA1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.25□□□□□ -2.05
PRPF39Q86UA1 AC026371.1-201ENST00000551867 419 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 AC121758.2-201ENST00000553271 193 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.25□□□□□ -2.05
PRPF39Q86UA1 ZNF519P2-201ENST00000557032 169 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 MIR5002-201ENST00000584713 97 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 BNIP3P25-201ENST00000596023 559 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 AC025754.2-201ENST00000606491 432 ntBASIC2.25□□□□□ -2.05
PRPF39Q86UA1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.25□□□□□ -2.05
PRPF39Q86UA1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
PRPF39Q86UA1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
PRPF39Q86UA1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
PRPF39Q86UA1 AL596028.1-201ENST00000326971 197 ntBASIC2.24□□□□□ -2.05
PRPF39Q86UA1 RNA5SP276-201ENST00000362580 94 ntBASIC2.24□□□□□ -2.05
PRPF39Q86UA1 RNU4-12P-201ENST00000365233 139 ntBASIC2.24□□□□□ -2.05
PRPF39Q86UA1 MIR17-201ENST00000385012 84 ntBASIC2.24□□□□□ -2.05
PRPF39Q86UA1 NDUFA5P4-201ENST00000436704 385 ntBASIC2.24□□□□□ -2.05
PRPF39Q86UA1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.24□□□□□ -2.05
PRPF39Q86UA1 IPO7P1-201ENST00000442031 636 ntBASIC2.24□□□□□ -2.05
PRPF39Q86UA1 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.24□□□□□ -2.05
PRPF39Q86UA1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.24□□□□□ -2.05
PRPF39Q86UA1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.24□□□□□ -2.05
PRPF39Q86UA1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.24□□□□□ -2.05
PRPF39Q86UA1 SCOCP1-201ENST00000554676 349 ntBASIC2.24□□□□□ -2.05
PRPF39Q86UA1 EIF1P4-201ENST00000572664 335 ntBASIC2.24□□□□□ -2.05
PRPF39Q86UA1 AL078605.1-201ENST00000603529 500 ntBASIC2.24□□□□□ -2.05
PRPF39Q86UA1 MIR6132-201ENST00000622083 109 ntBASIC2.24□□□□□ -2.05
PRPF39Q86UA1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
PRPF39Q86UA1 RNU6-451P-201ENST00000362921 107 ntBASIC2.23□□□□□ -2.05
PRPF39Q86UA1 RNU6-1252P-201ENST00000363054 104 ntBASIC2.23□□□□□ -2.05
PRPF39Q86UA1 Y_RNA.167-201ENST00000363735 109 ntBASIC2.23□□□□□ -2.05
PRPF39Q86UA1 SNORD113-7-201ENST00000363762 77 ntBASIC2.23□□□□□ -2.05
PRPF39Q86UA1 RNU6-234P-201ENST00000365229 104 ntBASIC2.23□□□□□ -2.05
PRPF39Q86UA1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PRPF39Q86UA1 SNORD116-4-201ENST00000384733 96 ntBASIC2.23□□□□□ -2.05
PRPF39Q86UA1 MIR521-1-201ENST00000384902 87 ntBASIC2.23□□□□□ -2.05
PRPF39Q86UA1 RNU11-3P-201ENST00000391111 133 ntBASIC2.23□□□□□ -2.05
PRPF39Q86UA1 SNORA11.4-201ENST00000408823 129 ntBASIC2.23□□□□□ -2.05
PRPF39Q86UA1 AC012306.1-201ENST00000423267 114 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 150.9 ms