Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC073410.2-201ENST00000603240 332 ntBASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 AP000654.2-201ENST00000605633 586 ntBASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 AC080128.1-201ENST00000474389 1917 ntBASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 AC092268.1-201ENST00000342691 405 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 RNU6-842P-201ENST00000384269 107 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 BTF3L4P2-201ENST00000392798 346 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 EIF1AXP1-201ENST00000419267 435 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 AC008267.5-201ENST00000424928 265 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 RPL30P4-201ENST00000429309 333 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 MTND3P9-201ENST00000429526 346 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 AC009296.1-201ENST00000443146 155 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 FTH1P25-201ENST00000447665 469 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 UBE2DNL-203ENST00000474922 222 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 RN7SL636P-201ENST00000497504 294 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 AC022447.4-201ENST00000504053 364 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 AC234781.5-201ENST00000508429 271 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 AC091874.1-201ENST00000511402 339 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 AL355375.2-201ENST00000574825 175 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 MIR3976-201ENST00000606807 139 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 AC067747.1-201ENST00000608026 250 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 AC009318.2-201ENST00000610917 651 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 AL359757.2-201ENST00000624309 274 ntBASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SYNE3Q6ZMZ3 KPNA2P1-201ENST00000458289 1591 ntBASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 SNORD50.1-201ENST00000362987 71 ntBASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 RNU4-73P-201ENST00000363164 141 ntBASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 RNU6-1210P-201ENST00000363775 107 ntBASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 RNU6-1188P-201ENST00000363795 107 ntBASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 SET-203ENST00000372688 801 ntTSL 2 BASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 SNORA11.2-201ENST00000408318 127 ntBASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 USP9YP30-201ENST00000430729 455 ntBASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 CR769767.1-201ENST00000436337 346 ntBASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 AC011753.1-201ENST00000451001 220 ntBASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 RNU7-152P-201ENST00000458982 64 ntBASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 RPL30P1-201ENST00000488676 339 ntBASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 Y_RNA.708-201ENST00000516950 96 ntBASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 MIR5696-201ENST00000578474 85 ntBASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 AC243829.7-201ENST00000633081 225 ntBASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 AC016717.2-201ENST00000609089 5141 ntBASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SYNE3Q6ZMZ3 ZNF271P-202ENST00000465539 1970 ntBASIC2.78□□□□□ -1.97
SYNE3Q6ZMZ3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 OR56A5-201ENST00000340110 738 ntBASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 MIR21-201ENST00000362134 72 ntBASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 Y_RNA.356-201ENST00000365475 113 ntBASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 RNU6-1297P-201ENST00000384415 104 ntBASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 SNORD116-29-201ENST00000384516 83 ntBASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 CBX3P9-201ENST00000402326 552 ntBASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 Y_RNA.594-201ENST00000410373 140 ntBASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 BX276092.3-201ENST00000424182 230 ntBASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 RPL30P12-201ENST00000474666 353 ntBASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 RPL23AP70-201ENST00000483361 460 ntBASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 AC016632.1-201ENST00000503994 196 ntBASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 ACA59.1-201ENST00000515966 143 ntBASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 Y_RNA.670-201ENST00000516255 105 ntBASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 APOOP3-201ENST00000536787 586 ntBASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 AC093027.1-201ENST00000546698 429 ntBASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 MYL12BP1-201ENST00000569826 507 ntBASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 MIR4513-201ENST00000581077 86 ntBASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 AC105245.1-201ENST00000581934 244 ntBASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 MIR3136-201ENST00000583498 78 ntBASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SYNE3Q6ZMZ3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.76□□□□□ -1.97
SYNE3Q6ZMZ3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SYNE3Q6ZMZ3 Y_RNA.61-201ENST00000362835 102 ntBASIC2.76□□□□□ -1.97
SYNE3Q6ZMZ3 RNU6-797P-201ENST00000363101 109 ntBASIC2.76□□□□□ -1.97
SYNE3Q6ZMZ3 RNU6-1059P-201ENST00000363752 98 ntBASIC2.76□□□□□ -1.97
SYNE3Q6ZMZ3 Y_RNA.500-201ENST00000384466 111 ntBASIC2.76□□□□□ -1.97
SYNE3Q6ZMZ3 RNU6-790P-201ENST00000384479 105 ntBASIC2.76□□□□□ -1.97
SYNE3Q6ZMZ3 MTCYBP4-201ENST00000401524 249 ntBASIC2.76□□□□□ -1.97
SYNE3Q6ZMZ3 RNU6-1050P-201ENST00000410388 107 ntBASIC2.76□□□□□ -1.97
SYNE3Q6ZMZ3 AC009963.1-201ENST00000417265 157 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms