Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC097372.5-201ENST00000623665 376 ntBASIC2.88□□□□□ -1.95
CIITAP33076 AC243829.7-201ENST00000633081 225 ntBASIC2.88□□□□□ -1.95
CIITAP33076 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.87□□□□□ -1.95
CIITAP33076 Y_RNA.252-201ENST00000364556 101 ntBASIC2.87□□□□□ -1.95
CIITAP33076 SNORA63C-201ENST00000364578 129 ntBASIC2.87□□□□□ -1.95
CIITAP33076 RNU6-692P-201ENST00000384496 107 ntBASIC2.87□□□□□ -1.95
CIITAP33076 SNORA67.4-201ENST00000384688 142 ntBASIC2.87□□□□□ -1.95
CIITAP33076 MIR592-201ENST00000384959 97 ntBASIC2.87□□□□□ -1.95
CIITAP33076 MTND3P9-201ENST00000429526 346 ntBASIC2.87□□□□□ -1.95
CIITAP33076 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.87□□□□□ -1.95
CIITAP33076 AC243964.1-201ENST00000441814 261 ntBASIC2.87□□□□□ -1.95
CIITAP33076 AL035666.1-201ENST00000446195 348 ntBASIC2.87□□□□□ -1.95
CIITAP33076 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.87□□□□□ -1.95
CIITAP33076 AL441985.1-201ENST00000457727 251 ntBASIC2.87□□□□□ -1.95
CIITAP33076 HMGN1P10-201ENST00000474557 553 ntBASIC2.87□□□□□ -1.95
CIITAP33076 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.87□□□□□ -1.95
CIITAP33076 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.87□□□□□ -1.95
CIITAP33076 AIG1P1-201ENST00000503376 148 ntBASIC2.87□□□□□ -1.95
CIITAP33076 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.87□□□□□ -1.95
CIITAP33076 RNU5F-8P-201ENST00000515941 111 ntBASIC2.87□□□□□ -1.95
CIITAP33076 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.87□□□□□ -1.95
CIITAP33076 MIR5696-201ENST00000578474 85 ntBASIC2.87□□□□□ -1.95
CIITAP33076 MIR5092-201ENST00000583139 88 ntBASIC2.87□□□□□ -1.95
CIITAP33076 AC040896.1-201ENST00000613819 479 ntBASIC2.87□□□□□ -1.95
CIITAP33076 U4.3-201ENST00000621047 82 ntBASIC2.87□□□□□ -1.95
CIITAP33076 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.87□□□□□ -1.95
CIITAP33076 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CIITAP33076 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.86□□□□□ -1.95
CIITAP33076 VTRNA1-1-201ENST00000363120 99 ntBASIC2.86□□□□□ -1.95
CIITAP33076 Y_RNA.148-201ENST00000363557 117 ntBASIC2.86□□□□□ -1.95
CIITAP33076 Y_RNA.162-201ENST00000363683 102 ntBASIC2.86□□□□□ -1.95
CIITAP33076 RNA5SP456-201ENST00000364002 114 ntBASIC2.86□□□□□ -1.95
CIITAP33076 SNORD116-20-201ENST00000384529 92 ntBASIC2.86□□□□□ -1.95
CIITAP33076 RNU6-738P-201ENST00000384531 106 ntBASIC2.86□□□□□ -1.95
CIITAP33076 Y_RNA.533-201ENST00000384596 114 ntBASIC2.86□□□□□ -1.95
CIITAP33076 RNA5SP210-201ENST00000391034 120 ntBASIC2.86□□□□□ -1.95
CIITAP33076 AL591034.2-201ENST00000402839 359 ntBASIC2.86□□□□□ -1.95
CIITAP33076 AC074117.2-201ENST00000417130 397 ntBASIC2.86□□□□□ -1.95
CIITAP33076 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.86□□□□□ -1.95
CIITAP33076 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.86□□□□□ -1.95
CIITAP33076 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.86□□□□□ -1.95
CIITAP33076 MRPS18CP6-201ENST00000423587 223 ntBASIC2.86□□□□□ -1.95
CIITAP33076 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.86□□□□□ -1.95
CIITAP33076 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.86□□□□□ -1.95
CIITAP33076 AC007969.2-201ENST00000441891 191 ntBASIC2.86□□□□□ -1.95
CIITAP33076 AC009296.1-201ENST00000443146 155 ntBASIC2.86□□□□□ -1.95
CIITAP33076 MTND4P19-201ENST00000446659 478 ntBASIC2.86□□□□□ -1.95
CIITAP33076 AL031659.1-201ENST00000447075 539 ntBASIC2.86□□□□□ -1.95
CIITAP33076 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.86□□□□□ -1.95
CIITAP33076 AC079354.2-201ENST00000453523 154 ntBASIC2.86□□□□□ -1.95
CIITAP33076 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.86□□□□□ -1.95
CIITAP33076 AC133134.1-201ENST00000466800 359 ntBASIC2.86□□□□□ -1.95
CIITAP33076 AP001025.1-201ENST00000486139 332 ntBASIC2.86□□□□□ -1.95
CIITAP33076 ACA59.1-201ENST00000515966 143 ntBASIC2.86□□□□□ -1.95
CIITAP33076 RNU6-1137P-201ENST00000517073 99 ntBASIC2.86□□□□□ -1.95
CIITAP33076 SNORA31.23-201ENST00000517219 133 ntBASIC2.86□□□□□ -1.95
CIITAP33076 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.86□□□□□ -1.95
CIITAP33076 AL391813.1-201ENST00000603098 260 ntBASIC2.86□□□□□ -1.95
CIITAP33076 AL360085.1-201ENST00000604713 532 ntBASIC2.86□□□□□ -1.95
CIITAP33076 AC018889.1-201ENST00000605372 397 ntBASIC2.86□□□□□ -1.95
CIITAP33076 AC241585.2-209ENST00000638217 143 ntBASIC2.86□□□□□ -1.95
CIITAP33076 RNU6-490P-201ENST00000362985 107 ntBASIC2.85□□□□□ -1.95
CIITAP33076 Y_RNA.202-201ENST00000364083 110 ntBASIC2.85□□□□□ -1.95
CIITAP33076 RNU6-1280P-201ENST00000365211 107 ntBASIC2.85□□□□□ -1.95
CIITAP33076 RNU6-933P-201ENST00000384424 107 ntBASIC2.85□□□□□ -1.95
CIITAP33076 MIR521-1-201ENST00000384902 87 ntBASIC2.85□□□□□ -1.95
CIITAP33076 RNU6-1106P-201ENST00000390845 107 ntBASIC2.85□□□□□ -1.95
CIITAP33076 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.85□□□□□ -1.95
CIITAP33076 AC009963.1-201ENST00000417265 157 ntBASIC2.85□□□□□ -1.95
CIITAP33076 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.85□□□□□ -1.95
CIITAP33076 AC092427.1-202ENST00000430569 476 ntBASIC2.85□□□□□ -1.95
CIITAP33076 RPS15AP7-201ENST00000439294 405 ntBASIC2.85□□□□□ -1.95
CIITAP33076 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.85□□□□□ -1.95
CIITAP33076 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.85□□□□□ -1.95
CIITAP33076 U8.21-201ENST00000459536 136 ntBASIC2.85□□□□□ -1.95
CIITAP33076 SRIP1-201ENST00000489235 288 ntBASIC2.85□□□□□ -1.95
CIITAP33076 RN7SKP295-201ENST00000517264 153 ntBASIC2.85□□□□□ -1.95
CIITAP33076 SUB1P3-201ENST00000564581 315 ntBASIC2.85□□□□□ -1.95
CIITAP33076 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.85□□□□□ -1.95
CIITAP33076 AC005899.2-201ENST00000584353 90 ntBASIC2.85□□□□□ -1.95
CIITAP33076 BNIP3P16-201ENST00000589779 534 ntBASIC2.85□□□□□ -1.95
CIITAP33076 AP001836.1-201ENST00000604675 523 ntBASIC2.85□□□□□ -1.95
CIITAP33076 AC007485.1-201ENST00000616755 206 ntBASIC2.85□□□□□ -1.95
CIITAP33076 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CIITAP33076 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
CIITAP33076 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.85□□□□□ -1.95
CIITAP33076 RNU6-227P-201ENST00000362865 103 ntBASIC2.84□□□□□ -1.95
CIITAP33076 RNU6-784P-201ENST00000384330 106 ntBASIC2.84□□□□□ -1.95
CIITAP33076 RNY1P14-201ENST00000384426 108 ntBASIC2.84□□□□□ -1.95
CIITAP33076 MIR606-201ENST00000384851 96 ntBASIC2.84□□□□□ -1.95
CIITAP33076 AP000275.1-201ENST00000411943 390 ntBASIC2.84□□□□□ -1.95
CIITAP33076 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.84□□□□□ -1.95
CIITAP33076 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.84□□□□□ -1.95
CIITAP33076 MCFD2P1-201ENST00000417812 300 ntBASIC2.84□□□□□ -1.95
CIITAP33076 AC008267.5-201ENST00000424928 265 ntBASIC2.84□□□□□ -1.95
CIITAP33076 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.84□□□□□ -1.95
CIITAP33076 AL161651.1-201ENST00000440882 223 ntBASIC2.84□□□□□ -1.95
CIITAP33076 AC068781.1-201ENST00000488231 618 ntBASIC2.84□□□□□ -1.95
CIITAP33076 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.84□□□□□ -1.95
CIITAP33076 RN7SKP40-201ENST00000517211 242 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms