Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 IL7-206ENST00000520269 456 ntTSL 3 BASIC-1.23□□□□□ -2.61
TOP2AP11388 AC011979.2-201ENST00000527568 352 ntBASIC-1.23□□□□□ -2.61
TOP2AP11388 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC-1.23□□□□□ -2.61
TOP2AP11388 AL109620.1-201ENST00000618738 1197 ntBASIC-1.23□□□□□ -2.61
TOP2AP11388 RNU6-1099P-201ENST00000363533 107 ntBASIC-1.24□□□□□ -2.61
TOP2AP11388 SNORD114-6-201ENST00000364393 72 ntBASIC-1.24□□□□□ -2.61
TOP2AP11388 MIR196A1-201ENST00000388006 70 ntBASIC-1.24□□□□□ -2.61
TOP2AP11388 SNORA12.1-201ENST00000390873 148 ntBASIC-1.24□□□□□ -2.61
TOP2AP11388 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-1.24□□□□□ -2.61
TOP2AP11388 AL049545.1-201ENST00000401856 572 ntBASIC-1.24□□□□□ -2.61
TOP2AP11388 MTND2P5-201ENST00000432656 1006 ntBASIC-1.24□□□□□ -2.61
TOP2AP11388 YWHAZP8-201ENST00000436935 731 ntBASIC-1.24□□□□□ -2.61
TOP2AP11388 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC-1.24□□□□□ -2.61
TOP2AP11388 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC-1.24□□□□□ -2.61
TOP2AP11388 AC124947.2-202ENST00000552735 133 ntBASIC-1.24□□□□□ -2.61
TOP2AP11388 AP001981.2-201ENST00000603241 418 ntBASIC-1.24□□□□□ -2.61
TOP2AP11388 AL590229.1-201ENST00000603497 542 ntBASIC-1.24□□□□□ -2.61
TOP2AP11388 RMST_4.1-201ENST00000616886 107 ntBASIC-1.24□□□□□ -2.61
TOP2AP11388 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-1.25□□□□□ -2.61
TOP2AP11388 Y_RNA.132-201ENST00000363421 102 ntBASIC-1.25□□□□□ -2.61
TOP2AP11388 RNY3-201ENST00000365484 102 ntBASIC-1.25□□□□□ -2.61
TOP2AP11388 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC-1.25□□□□□ -2.61
TOP2AP11388 RPS27AP8-201ENST00000452665 445 ntBASIC-1.25□□□□□ -2.61
TOP2AP11388 RNU6-947P-201ENST00000516264 106 ntBASIC-1.25□□□□□ -2.61
TOP2AP11388 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-1.25□□□□□ -2.61
TOP2AP11388 AC022616.2-201ENST00000523185 300 ntBASIC-1.25□□□□□ -2.61
TOP2AP11388 AL022067.1-201ENST00000602426 454 ntBASIC-1.25□□□□□ -2.61
TOP2AP11388 BNIP3P31-201ENST00000604515 566 ntBASIC-1.25□□□□□ -2.61
TOP2AP11388 AC004908.3-201ENST00000610248 625 ntBASIC-1.25□□□□□ -2.61
TOP2AP11388 AL163051.2-201ENST00000618976 735 ntBASIC-1.25□□□□□ -2.61
TOP2AP11388 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-1.25□□□□□ -2.61
TOP2AP11388 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-1.25□□□□□ -2.61
TOP2AP11388 AL162725.1-201ENST00000435405 301 ntBASIC-1.25□□□□□ -2.61
TOP2AP11388 RPS20P24-201ENST00000457473 361 ntBASIC-1.25□□□□□ -2.61
TOP2AP11388 AC112771.1-201ENST00000463581 102 ntBASIC-1.25□□□□□ -2.61
TOP2AP11388 SCARNA17-201ENST00000516183 144 ntBASIC-1.25□□□□□ -2.61
TOP2AP11388 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-1.25□□□□□ -2.61
TOP2AP11388 MIR4436A-201ENST00000585278 85 ntBASIC-1.25□□□□□ -2.61
TOP2AP11388 AL034555.1-201ENST00000604816 211 ntBASIC-1.25□□□□□ -2.61
TOP2AP11388 AC004805.2-201ENST00000605382 482 ntBASIC-1.25□□□□□ -2.61
TOP2AP11388 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-1.25□□□□□ -2.61
TOP2AP11388 AL451064.1-201ENST00000607718 471 ntBASIC-1.25□□□□□ -2.61
TOP2AP11388 AC010615.1-201ENST00000594254 1764 ntBASIC-1.26□□□□□ -2.61
TOP2AP11388 MTND4P5-201ENST00000435821 1374 ntBASIC-1.26□□□□□ -2.61
TOP2AP11388 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-1.26□□□□□ -2.61
TOP2AP11388 SNORD83B-201ENST00000386745 93 ntBASIC-1.26□□□□□ -2.61
TOP2AP11388 NDUFS5P4-201ENST00000412983 318 ntBASIC-1.26□□□□□ -2.61
TOP2AP11388 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.26□□□□□ -2.61
TOP2AP11388 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-1.26□□□□□ -2.61
TOP2AP11388 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC-1.26□□□□□ -2.61
TOP2AP11388 ZNF736P6Y-201ENST00000447526 1213 ntBASIC-1.26□□□□□ -2.61
TOP2AP11388 SPINT5P-201ENST00000448174 155 ntBASIC-1.26□□□□□ -2.61
TOP2AP11388 MTND1P17-201ENST00000448961 204 ntBASIC-1.26□□□□□ -2.61
TOP2AP11388 MTCO2P18-201ENST00000457151 658 ntBASIC-1.26□□□□□ -2.61
TOP2AP11388 AC079598.5-201ENST00000547460 117 ntBASIC-1.26□□□□□ -2.61
TOP2AP11388 BNIP3P6-201ENST00000549284 499 ntBASIC-1.26□□□□□ -2.61
TOP2AP11388 AL713998.2-201ENST00000604538 1198 ntBASIC-1.26□□□□□ -2.61
TOP2AP11388 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC-1.26□□□□□ -2.61
TOP2AP11388 AL162726.3-218ENST00000636401 95 ntBASIC-1.26□□□□□ -2.61
TOP2AP11388 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-1.27□□□□□ -2.61
TOP2AP11388 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-1.27□□□□□ -2.61
TOP2AP11388 MTCYBP10-201ENST00000424905 650 ntBASIC-1.27□□□□□ -2.61
TOP2AP11388 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-1.27□□□□□ -2.61
TOP2AP11388 snoU13.27-201ENST00000459278 104 ntBASIC-1.27□□□□□ -2.61
TOP2AP11388 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC-1.27□□□□□ -2.61
TOP2AP11388 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC-1.27□□□□□ -2.61
TOP2AP11388 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-1.27□□□□□ -2.61
TOP2AP11388 AC004584.2-201ENST00000570407 410 ntBASIC-1.27□□□□□ -2.61
TOP2AP11388 MTND1P15-201ENST00000579262 949 ntBASIC-1.27□□□□□ -2.61
TOP2AP11388 MIR4263-201ENST00000584745 83 ntBASIC-1.27□□□□□ -2.61
TOP2AP11388 MIR4324-201ENST00000584846 72 ntBASIC-1.27□□□□□ -2.61
TOP2AP11388 AP002360.4-201ENST00000606980 481 ntBASIC-1.27□□□□□ -2.61
TOP2AP11388 RNU6-87P-201ENST00000607561 108 ntBASIC-1.27□□□□□ -2.61
TOP2AP11388 GHRLOS.1-201ENST00000610995 70 ntBASIC-1.27□□□□□ -2.61
TOP2AP11388 AC018926.1-201ENST00000616335 435 ntBASIC-1.27□□□□□ -2.61
TOP2AP11388 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-1.27□□□□□ -2.61
TOP2AP11388 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-1.28□□□□□ -2.61
TOP2AP11388 MRPL42P4-201ENST00000453267 443 ntBASIC-1.28□□□□□ -2.61
TOP2AP11388 AC022364.2-201ENST00000457963 554 ntBASIC-1.28□□□□□ -2.61
TOP2AP11388 SCARNA18-201ENST00000459004 134 ntBASIC-1.28□□□□□ -2.61
TOP2AP11388 AC093259.1-201ENST00000509755 300 ntBASIC-1.28□□□□□ -2.61
TOP2AP11388 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-1.28□□□□□ -2.61
TOP2AP11388 AC074133.1-201ENST00000515696 183 ntBASIC-1.28□□□□□ -2.61
TOP2AP11388 MIR3165-201ENST00000579874 75 ntBASIC-1.28□□□□□ -2.61
TOP2AP11388 RMST_5.1-201ENST00000618704 126 ntBASIC-1.28□□□□□ -2.61
TOP2AP11388 MIR103A2-201ENST00000362154 78 ntBASIC-1.29□□□□□ -2.62
TOP2AP11388 RNU6-858P-201ENST00000362436 107 ntBASIC-1.29□□□□□ -2.62
TOP2AP11388 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.29□□□□□ -2.62
TOP2AP11388 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-1.29□□□□□ -2.62
TOP2AP11388 AC120349.3-201ENST00000624377 529 ntBASIC-1.29□□□□□ -2.62
TOP2AP11388 MIR3529-201ENST00000637713 78 ntBASIC-1.29□□□□□ -2.62
TOP2AP11388 MTND4P8-201ENST00000514997 1362 ntBASIC-1.29□□□□□ -2.62
TOP2AP11388 Y_RNA.256-201ENST00000364594 104 ntBASIC-1.3□□□□□ -2.62
TOP2AP11388 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-1.3□□□□□ -2.62
TOP2AP11388 RNU4-49P-201ENST00000516080 140 ntBASIC-1.3□□□□□ -2.62
TOP2AP11388 SNORA27.4-201ENST00000516650 95 ntBASIC-1.3□□□□□ -2.62
TOP2AP11388 RNU6-567P-201ENST00000516746 107 ntBASIC-1.3□□□□□ -2.62
TOP2AP11388 MIR4432-201ENST00000581823 84 ntBASIC-1.3□□□□□ -2.62
TOP2AP11388 AC131055.1-201ENST00000584626 316 ntBASIC-1.3□□□□□ -2.62
TOP2AP11388 AC010615.3-201ENST00000597319 394 ntBASIC-1.3□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms