Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19■□□□□ 0.63
Scn11aQ9R053 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn11aQ9R053 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scn11aQ9R053 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn11aQ9R053 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn11aQ9R053 Haglr-201ENSMUST00000100000 2085 ntBASIC19■□□□□ 0.63
Scn11aQ9R053 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn11aQ9R053 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn11aQ9R053 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.99■□□□□ 0.63
Scn11aQ9R053 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn11aQ9R053 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn11aQ9R053 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn11aQ9R053 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.99■□□□□ 0.63
Scn11aQ9R053 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
Scn11aQ9R053 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.99■□□□□ 0.63
Scn11aQ9R053 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.99■□□□□ 0.63
Scn11aQ9R053 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn11aQ9R053 Gm27300-201ENSMUST00000184085 97 ntBASIC18.99■□□□□ 0.63
Scn11aQ9R053 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.99■□□□□ 0.63
Scn11aQ9R053 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.99■□□□□ 0.63
Scn11aQ9R053 Gm27335-201ENSMUST00000184758 97 ntBASIC18.99■□□□□ 0.63
Scn11aQ9R053 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.99■□□□□ 0.63
Scn11aQ9R053 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.99■□□□□ 0.63
Scn11aQ9R053 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.99■□□□□ 0.63
Scn11aQ9R053 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.99■□□□□ 0.63
Scn11aQ9R053 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn11aQ9R053 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn11aQ9R053 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.99■□□□□ 0.63
Scn11aQ9R053 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn11aQ9R053 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn11aQ9R053 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn11aQ9R053 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Scn11aQ9R053 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn11aQ9R053 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn11aQ9R053 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scn11aQ9R053 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn11aQ9R053 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn11aQ9R053 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scn11aQ9R053 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scn11aQ9R053 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn11aQ9R053 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scn11aQ9R053 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn11aQ9R053 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Scn11aQ9R053 Gm15358-201ENSMUST00000119249 520 ntBASIC18.98■□□□□ 0.63
Scn11aQ9R053 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.98■□□□□ 0.63
Scn11aQ9R053 Gm44872-201ENSMUST00000207864 420 ntBASIC18.98■□□□□ 0.63
Scn11aQ9R053 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.98■□□□□ 0.63
Scn11aQ9R053 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scn11aQ9R053 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn11aQ9R053 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn11aQ9R053 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn11aQ9R053 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn11aQ9R053 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn11aQ9R053 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn11aQ9R053 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn11aQ9R053 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn11aQ9R053 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.97■□□□□ 0.63
Scn11aQ9R053 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn11aQ9R053 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Scn11aQ9R053 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn11aQ9R053 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn11aQ9R053 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.97■□□□□ 0.63
Scn11aQ9R053 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn11aQ9R053 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn11aQ9R053 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn11aQ9R053 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn11aQ9R053 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Gm19164-201ENSMUST00000210667 640 ntBASIC18.96■□□□□ 0.63
Scn11aQ9R053 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.96■□□□□ 0.63
Scn11aQ9R053 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.96■□□□□ 0.63
Scn11aQ9R053 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn11aQ9R053 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.96■□□□□ 0.63
Scn11aQ9R053 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.96■□□□□ 0.63
Scn11aQ9R053 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.96■□□□□ 0.63
Scn11aQ9R053 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Gm4899-201ENSMUST00000178708 719 ntBASIC18.96■□□□□ 0.63
Scn11aQ9R053 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn11aQ9R053 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn11aQ9R053 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn11aQ9R053 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn11aQ9R053 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn11aQ9R053 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms