Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chaf1aQ9QWF0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Chaf1aQ9QWF0 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.08■□□□□ 0.48
Chaf1aQ9QWF0 Gm37055-201ENSMUST00000191866 133 ntBASIC18.08■□□□□ 0.48
Chaf1aQ9QWF0 Gm30025-201ENSMUST00000218555 728 ntBASIC18.08■□□□□ 0.48
Chaf1aQ9QWF0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Chaf1aQ9QWF0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Chaf1aQ9QWF0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chaf1aQ9QWF0 Gm10566-201ENSMUST00000086739 996 ntBASIC18.08■□□□□ 0.48
Chaf1aQ9QWF0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.08■□□□□ 0.48
Chaf1aQ9QWF0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chaf1aQ9QWF0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chaf1aQ9QWF0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chaf1aQ9QWF0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chaf1aQ9QWF0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chaf1aQ9QWF0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chaf1aQ9QWF0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chaf1aQ9QWF0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Gm11539-201ENSMUST00000119837 557 ntBASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chaf1aQ9QWF0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Gm13436-201ENSMUST00000120418 567 ntBASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chaf1aQ9QWF0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chaf1aQ9QWF0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chaf1aQ9QWF0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chaf1aQ9QWF0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chaf1aQ9QWF0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.04■□□□□ 0.48
Chaf1aQ9QWF0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chaf1aQ9QWF0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chaf1aQ9QWF0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.04■□□□□ 0.48
Chaf1aQ9QWF0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Chaf1aQ9QWF0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Chaf1aQ9QWF0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chaf1aQ9QWF0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms