Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx5Q9JL61 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx5Q9JL61 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx5Q9JL61 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Rfx5Q9JL61 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx5Q9JL61 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Gm24589-201ENSMUST00000116692 94 ntBASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Gm7506-201ENSMUST00000207758 815 ntBASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx5Q9JL61 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx5Q9JL61 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rfx5Q9JL61 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx5Q9JL61 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx5Q9JL61 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx5Q9JL61 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rfx5Q9JL61 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx5Q9JL61 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17■□□□□ 0.31
Rfx5Q9JL61 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx5Q9JL61 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17■□□□□ 0.31
Rfx5Q9JL61 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17■□□□□ 0.31
Rfx5Q9JL61 Gm27459-201ENSMUST00000184860 107 ntBASIC17■□□□□ 0.31
Rfx5Q9JL61 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx5Q9JL61 AC160338.1-201ENSMUST00000214232 705 ntBASIC17■□□□□ 0.31
Rfx5Q9JL61 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rfx5Q9JL61 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx5Q9JL61 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx5Q9JL61 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx5Q9JL61 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx5Q9JL61 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx5Q9JL61 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rfx5Q9JL61 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx5Q9JL61 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx5Q9JL61 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx5Q9JL61 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx5Q9JL61 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx5Q9JL61 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx5Q9JL61 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms