Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube3bQ9ES34 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ube3bQ9ES34 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ube3bQ9ES34 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube3bQ9ES34 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube3bQ9ES34 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ube3bQ9ES34 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube3bQ9ES34 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube3bQ9ES34 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube3bQ9ES34 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.12■□□□□ 0.65
Ube3bQ9ES34 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.12■□□□□ 0.65
Ube3bQ9ES34 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube3bQ9ES34 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube3bQ9ES34 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube3bQ9ES34 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube3bQ9ES34 Gm13418-201ENSMUST00000119097 944 ntBASIC19.12■□□□□ 0.65
Ube3bQ9ES34 Gm11780-201ENSMUST00000136880 516 ntBASIC19.12■□□□□ 0.65
Ube3bQ9ES34 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.12■□□□□ 0.65
Ube3bQ9ES34 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ube3bQ9ES34 Gm18195-201ENSMUST00000207604 706 ntBASIC19.12■□□□□ 0.65
Ube3bQ9ES34 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube3bQ9ES34 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube3bQ9ES34 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube3bQ9ES34 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube3bQ9ES34 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube3bQ9ES34 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube3bQ9ES34 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube3bQ9ES34 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube3bQ9ES34 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube3bQ9ES34 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube3bQ9ES34 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube3bQ9ES34 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube3bQ9ES34 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ube3bQ9ES34 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ube3bQ9ES34 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.11■□□□□ 0.65
Ube3bQ9ES34 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Ube3bQ9ES34 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube3bQ9ES34 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube3bQ9ES34 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ube3bQ9ES34 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Gm25990-201ENSMUST00000102440 86 ntBASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Gm18622-201ENSMUST00000219361 595 ntBASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube3bQ9ES34 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.09■□□□□ 0.65
Ube3bQ9ES34 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ube3bQ9ES34 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ube3bQ9ES34 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ube3bQ9ES34 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ube3bQ9ES34 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ube3bQ9ES34 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ube3bQ9ES34 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ube3bQ9ES34 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ube3bQ9ES34 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms