Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Gm2559-201ENSMUST00000201323 363 ntBASIC15.56■□□□□ 0.08
Ube4bQ9ES00 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ube4bQ9ES00 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ube4bQ9ES00 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4bQ9ES00 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.54■□□□□ 0.08
Ube4bQ9ES00 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4bQ9ES00 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4bQ9ES00 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4bQ9ES00 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4bQ9ES00 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4bQ9ES00 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4bQ9ES00 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4bQ9ES00 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4bQ9ES00 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4bQ9ES00 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Ube4bQ9ES00 Gm4968-201ENSMUST00000071458 858 ntBASIC15.54■□□□□ 0.08
Ube4bQ9ES00 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.54■□□□□ 0.08
Ube4bQ9ES00 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4bQ9ES00 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4bQ9ES00 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4bQ9ES00 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4bQ9ES00 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ube4bQ9ES00 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4bQ9ES00 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4bQ9ES00 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ube4bQ9ES00 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ube4bQ9ES00 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4bQ9ES00 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.53■□□□□ 0.08
Ube4bQ9ES00 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4bQ9ES00 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4bQ9ES00 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4bQ9ES00 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4bQ9ES00 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.53■□□□□ 0.08
Ube4bQ9ES00 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4bQ9ES00 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4bQ9ES00 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4bQ9ES00 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4bQ9ES00 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4bQ9ES00 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ube4bQ9ES00 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube4bQ9ES00 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ube4bQ9ES00 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ube4bQ9ES00 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube4bQ9ES00 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube4bQ9ES00 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube4bQ9ES00 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube4bQ9ES00 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.52■□□□□ 0.08
Ube4bQ9ES00 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ube4bQ9ES00 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ube4bQ9ES00 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ube4bQ9ES00 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.52■□□□□ 0.07
Ube4bQ9ES00 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms