Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps35Q9EQH3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps35Q9EQH3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.16■□□□□ 0.18
Vps35Q9EQH3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.16■□□□□ 0.18
Vps35Q9EQH3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.16■□□□□ 0.18
Vps35Q9EQH3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Gm14859-201ENSMUST00000117752 357 ntBASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps35Q9EQH3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Gm15794-201ENSMUST00000120182 631 ntBASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Vps35Q9EQH3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Gm10052-201ENSMUST00000168019 960 ntBASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Gm27742-201ENSMUST00000184667 60 ntBASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Gm21362-201ENSMUST00000194272 928 ntBASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Gm44430-201ENSMUST00000203376 995 ntBASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Gm7729-201ENSMUST00000050143 801 ntBASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps35Q9EQH3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps35Q9EQH3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.12■□□□□ 0.17
Vps35Q9EQH3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms